Gene SbBS512_E2761 details

Gene Information

• Locus tag: SbBS512_E2761
• Symbol: nupC
• ID: 6271857
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: +
• Start bp: 2567743
• End bp: 2568945
• Gene Length: 1203 bp
• Protein Length: 400 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 641726720
• Product: nucleoside transporter NupC
• Protein accession: YP_001881199
• Protein GI: 187732844
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG1972] Nucleoside permease
• TIGRFAM ID: [TIGR00804] nucleoside transporter

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 0.246953
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGACCGCG TCCTTCATTT TGTACTGGCA CTTGCCGTTG TTGCGATTCT CGCACTGCTG 
GTAAGCAGCG ACCGCAAAAA AATTCGTATC CGTTATGTTA TTCAACTGCT TGTTATCGAA 
GTGTTACTGG CGTGGTTCTT CCTGAACTCC GACGTTGGTT TAGGCTTCGT GAAAGGCTTC 
TCCGAAATGT TCGAAAAACT GCTCGGATTT GCCAACGAAG GGACTAACTT CGTCTTTGGT 
AGCATGAATG ATCAAGGCCT GGCATTCTTC TTCCTGAAAG TGCTGTGCCC AATCGTCTTT 
ATCTCTGCAC TGATCGGTAT TCTCCAGCAC ATTCGCGTGT TGCCGGTGAT CATCCGCGCA 
ATTGGTTTCC TGCTCTCCAA AGTCAACGGC ATGGGCAAAC TGGAATCCTT TAACGCCGTC 
AGCTCCCTGA TTCTGGGTCA GTCTGAAAAC TTTATTGCCT ATAAAGATAT CCTCGGCAAA 
ATCTCCCGTA ATCGTATGTA CACCATGGCT GCCACGGCAA TGTCCACCGT GTCGATGTCC 
ATCGTTGGTG CATACATGAC CATGCTGGAA CCGAAATACG TCGTTGCTGC GCTGGTATTG 
AACATGTTCA GCACCTTTAT CGTGCTGTCG CTGATCAACC CTTACCGTGT TGATGCCAGT 
GAAGAAAACA TTCAGATGTC CAACCTGCAC GAAGGTCAGA GCTTCTTCGA AATGCTGGGT 
GAATACATTC TGGCAGGTTT CAAAGTTGCC ATTATCGTTG CCGCGATGCT GATCGGCTTT 
ATCGCCCTGA TCGCTGCGCT GAACGCACTG TTTGCCACCG TGACTGGCTG GTTTGGCTAC 
AGCATCTCCT TCCAGGGCAT TCTGGGCTAC ATCTTCTATC CGATTGCATG GGTGATGGGT 
GTTCCTTCCA GTGAAGCACT GCAAGTGGGC AGTATCATGG CGACCAAACT GGTTTCCAAC 
GAGTTCGTTG CGATGATGGA TCTGCAGAAA ATTGCTTCCA CGCTCTCTCC GCGTGCTGAA 
GGCATCATCT CTGTGTTCCT GGTTTCCTTC GCTAACTTCT CTTCAATCGG GATTATCGCA 
GGTGCAGTTA AAGGCCTGAA TGAAGAGCAA GGTAACGTGG TTTCTCGCTT CGGTCTGAAA 
CTGGTTTACG GCTCTACCCT GGTGAGTGTG CTGTCTGCGT CAATCGCAGC ACTGGTGCTG 
TAA 

 

Protein sequence

MDRVLHFVLA LAVVAILALL VSSDRKKIRI RYVIQLLVIE VLLAWFFLNS DVGLGFVKGF 
SEMFEKLLGF ANEGTNFVFG SMNDQGLAFF FLKVLCPIVF ISALIGILQH IRVLPVIIRA 
IGFLLSKVNG MGKLESFNAV SSLILGQSEN FIAYKDILGK ISRNRMYTMA ATAMSTVSMS 
IVGAYMTMLE PKYVVAALVL NMFSTFIVLS LINPYRVDAS EENIQMSNLH EGQSFFEMLG 
EYILAGFKVA IIVAAMLIGF IALIAALNAL FATVTGWFGY SISFQGILGY IFYPIAWVMG 
VPSSEALQVG SIMATKLVSN EFVAMMDLQK IASTLSPRAE GIISVFLVSF ANFSSIGIIA 
GAVKGLNEEQ GNVVSRFGLK LVYGSTLVSV LSASIAALVL