| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E2721 |
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| Symbol | fadJ |
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| ID | 6270989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 2520744 |
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| End bp | 2522888 |
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| Gene Length | 2145 bp |
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| Protein Length | 714 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641726684 |
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| Product | multifunctional fatty acid oxidation complex subunit alpha |
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| Protein accession | YP_001881164 |
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| Protein GI | 187730524 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | [TIGR02440] fatty oxidation complex, alpha subunit FadJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAATGG CATCAGCGTT TACTCTTAAT GTTCGTCTGG ACAACATTGC TATCATCACC
ATCGACGTAC CGGATGAGAA AATGAATACC CTGAAGGCGG AATTTGCCTC GCAGGTGCGC
GCCATTATTA AGCAACTCCG TGAAAACAAA GAGTTGCGCG GCGTGGTGTT TATCTCCGCG
AAACCGGACA ATTTTATCGC CGGAGCAGAC ATCAACATGA TCGGCAACTG CAAAACGGCG
CAAGAAGCGG AAGCTCTGGC GCGGCAGGGC CAACAGTTGA TGGCGGAGAT TCATGCTTTG
CCCATTCCGG TTATCGCGGC TATTCATGGC GCTTGCCTGG GTGGTGGGCT GGAGTTGGCG
CTGGCGTGCC ACGGTCGCGT TTGTACTGAC GATCCTAAAA CGGTGCTCGG TTTGCCTGAA
GTACAACTTG GATTGTTACC CGGTTCAGGC GGCACCCAGC GTTTACCGCG TCTGATAGGC
GTCAGCACAG CATTAGAGAT GATCCTCACC GGAAAACAAC TTCGGGCGAA ACAGGCATTA
AAGCTGGGGC TGGTGGATGA CGTTGTTCCG CACTCCATTT TGCTGGAAGT CGCTGTTGAG
CTGGCGAAGA AGGATCGCCC ATCTTCCCGC CCTCTACCTG TACGCGAGCG TATTCTGGCG
GGGCCGTTAG GTCGTGCGCT GCTGTTCAAA ATGGTCGGCA AGAAAACAGA ACACAAAACT
CAAGGCAATT ATCCGGCGAC AGAACGTATC CTGGAGGTTG TTGAAACGGG ATTAGCGCAG
GGCACCAGCA GCGGTTATGA CGCCGAAGCT CGGGCGTTTG GCGAACTGGC GATGACGCCA
CAATCGCAGG CGCTGCGTAG TATCTTTTTT GCCAGTACGG ACGTGAAGAA AGATCCCGGT
AGTGATGCAC CGCCTGCGCC ATTAAACAGC GTGGGAATTT TAGGTGGTGG CTTGATGGGC
GGCGGTATTG CTTATGTCAC TGCTTGTAAA GCGGGGCTTC CGGTCAGAAT TAAAGATATC
AACCCGCAGG GCATAAATCA TGCGCTGAAG TACAGTTGGG ATCAGCTGGA GGGCAAAGTT
CGCCGTCGTC ATCTCAAAGC CAGCGAACGT GACAAACAGC TGGCATTAAT CTCCGGAACG
ACGGACTATC GCGGCTTTGC CCATCGCGAT CTGATTATTG AAGCGGTGTT TGAAAATCTC
GAATTGAAAC AACAGATGGT GGCGGAAGTT GAGCAAAATT GCGCCGCTCA TACCATCTTT
GCTTCGAATA CGTCATCTTT ACCGATTGGT GATATCGCCG CTCACGCCAC GCGACCTGAG
CAAGTTATCG GCCTGCATTT CTTCAGTCCG GTGGAAAAAA TGCCGCTGGT GGAGATTATT
CCTCATGCGG GTACATCAGC GCAAACCATC GCCACTACGG TAAAACTGGC GAAAAAACAG
GGCAAAACGC CCATTGTCGT GCGTGACAAA GCCGGGTTTT ACGTCAATCG CATCTTAGCG
CCTTACATTA ATGAAGCTAT CCGCATGCTG ACCAAAGGTG AACGGGTAGA GCACATTGAT
GCCGCGCTAG TGAAATTTGG TTTTCCGGTA GGTCCAATCC AACTTTTGGA TGAGGTAGGA
ATCGACACCG GGACTAAAAT TATTCCTGTA CTGGAAGCCG CTTATGGAGA ACGTTTTAGC
GCGCCTGCAA ATGTTGTTTC TTCAATTTTG AACGATGATC GCAAAGGCAG AAAAAATGGT
CGGGGTTTCT ATCTTTATGG TCAGAAAGGG CGTAAAAGCA AAAAACAGGT CGATCCCGCC
ATTTACCCGC TCATTGGCGC ACAAGGGCAG GGGCGACTCT CCGCACCGCA GGTTGCTGAA
CGGTGTGTGA TGTTGATGCT GAATGAAGCA GTACGTTGTG TTGATGAGCA GGTTATCCGT
AGCGTGCGTG ACGGGGATAT TGGTGCGGTA TTTGGCATTG GTTTTCCGCC ATTTCTCGGT
GGACCGTTCC GCTATATCGA TTCTCTCGGC GCGGGCGAAG TGGTTGCAAT AATGCAACGA
CTGGCCACGC AGTATGGTTC CCGTTTTACC CCTTGCGAGC GTTTGGTCGA GATGGGCGCG
CGTGGGGAAA GTTTTTGGAA AACAACTGCA ACTGACCTGC AATAA
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| Protein sequence | MEMASAFTLN VRLDNIAIIT IDVPDEKMNT LKAEFASQVR AIIKQLRENK ELRGVVFISA
KPDNFIAGAD INMIGNCKTA QEAEALARQG QQLMAEIHAL PIPVIAAIHG ACLGGGLELA
LACHGRVCTD DPKTVLGLPE VQLGLLPGSG GTQRLPRLIG VSTALEMILT GKQLRAKQAL
KLGLVDDVVP HSILLEVAVE LAKKDRPSSR PLPVRERILA GPLGRALLFK MVGKKTEHKT
QGNYPATERI LEVVETGLAQ GTSSGYDAEA RAFGELAMTP QSQALRSIFF ASTDVKKDPG
SDAPPAPLNS VGILGGGLMG GGIAYVTACK AGLPVRIKDI NPQGINHALK YSWDQLEGKV
RRRHLKASER DKQLALISGT TDYRGFAHRD LIIEAVFENL ELKQQMVAEV EQNCAAHTIF
ASNTSSLPIG DIAAHATRPE QVIGLHFFSP VEKMPLVEII PHAGTSAQTI ATTVKLAKKQ
GKTPIVVRDK AGFYVNRILA PYINEAIRML TKGERVEHID AALVKFGFPV GPIQLLDEVG
IDTGTKIIPV LEAAYGERFS APANVVSSIL NDDRKGRKNG RGFYLYGQKG RKSKKQVDPA
IYPLIGAQGQ GRLSAPQVAE RCVMLMLNEA VRCVDEQVIR SVRDGDIGAV FGIGFPPFLG
GPFRYIDSLG AGEVVAIMQR LATQYGSRFT PCERLVEMGA RGESFWKTTA TDLQ
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