Gene SbBS512_E2665 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E2665 
SymbollrhA 
ID6271112 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp2466255 
End bp2467193 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content50% 
IMG OID641726630 
Producttranscriptional regulator LrhA 
Protein accessionYP_001881110 
Protein GI187731788 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0194806 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAGTG CAAATCGTCC GATAATTAAC CTCGACCTCG ATCTGCTGAG AACATTTGTT 
GCTGTTGCCG ATCTGAACAC TTTTGCTGCC GCAGCTGCCG CTGTGTGTCG TACTCAGTCC
GCCGTAAGTC AGCAAATGCA GCGTCTGGAA CAACTCGTTG GGAAAGAACT GTTCGCTCGT
CACGGTCGCA ACAAACTGTT AACTGAACAT GGCATTCAAC TTCTTGGTTA CGCCAGGAAA
ATCCTGCGTT TTAATGATGA GGCCTGCTCA TCATTAATGT TCAGTAATCT TCAGGGCGTG
TTAACTATCG GTGCTTCAGA TGAATCTGCC GATACGATCT TACCTTTCCT GTTAAATCGC
GTGAGTTCGG TTTATCCGAA ATTAGCGCTG GATGTCCGCG TTAAACGTAA TGCCTATATG
GCAGAAATGC TGGAATCCCA GGAAGTGGAT TTGATGGTAA CCACCCATCG TCCTTCAGCG
TTTAAGGCAT TGAACCTGCG TACCTCGCCA ACACACTGGT ACTGCGCAGC GGAATACGTA
TTGCAAAAAG GCGAGCCGAT CCCTCTTGTA TTGCTGGATG ATCCAAGTCC GTTTCGCGAT
ATGGTGCTGG CAACGCTTAA TAAAGCAGAT ATTCCATGGC GACTGGCTTA TGTCGCCTCG
ACGCTTCCGG CCGTTCGTGC GGCAGTGAAA GCCGGTCTTG GCGTGACGGC AAGGCCGGTT
GAGATGATGA GCCCGGACCT GCGTGTGCTG AGTGGAGTAG ATGGCTTACC GCCGCTACCT
GATACCGAAT ATTTGCTGTG CTATGACCCG TCCAGTAATA ATGAGCTGGC CCAGGTGATC
TATCAGGCGA TGGAGAGCTA CCATAATCCG TGGCAATACA GCCCAATGTC TGCTCCGGAA
GGGGATGATT CATTGTTGAT TGAAAGGGAT ATCGAGTAA
 
Protein sequence
MISANRPIIN LDLDLLRTFV AVADLNTFAA AAAAVCRTQS AVSQQMQRLE QLVGKELFAR 
HGRNKLLTEH GIQLLGYARK ILRFNDEACS SLMFSNLQGV LTIGASDESA DTILPFLLNR
VSSVYPKLAL DVRVKRNAYM AEMLESQEVD LMVTTHRPSA FKALNLRTSP THWYCAAEYV
LQKGEPIPLV LLDDPSPFRD MVLATLNKAD IPWRLAYVAS TLPAVRAAVK AGLGVTARPV
EMMSPDLRVL SGVDGLPPLP DTEYLLCYDP SSNNELAQVI YQAMESYHNP WQYSPMSAPE
GDDSLLIERD IE