Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E2647 |
Symbol | rnz |
ID | 6272476 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 2446700 |
End bp | 2447617 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641726614 |
Product | ribonuclease Z |
Protein accession | YP_001881094 |
Protein GI | 187732862 |
COG category | [R] General function prediction only |
COG ID | [COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III |
TIGRFAM ID | [TIGR02649] ribonuclease BN [TIGR02651] ribonuclease Z |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.313305 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAATTAA TTTTTTTAGG TACTTCAGCC GGTGTGCCAA CCCGCACGCG CAATGTCACG GCAATATTGC TTAACCTGCA ACATCCGACC CAGAGCGGAC TTTGGTTGTT TGACTGCGGT GAAGGCACCC AGCATCAGCT ACTGCATACC GCCTTTAACC CTGGAAAACT GGACAAGATT TTTATCAGTC ACCTTCATGG CGATCATCTT TTTGGTTTAC CCGGCTTGCT GTGCAGTCGT TCTATGTCAG GCATTATCCA ACCCTTAACG ATTTATGGTC CGCAAGGTAT CCGTGAATTT GTGGAAACCG CGCTGCGGAT TAGCGGCTCA TGGACCGATT ATCCGCTGGA AATTGTCGAA ATTGGCGCTG GCGAAATTCT CGATGATGGC CTGCGCAAAG TAACCGCTTA TCCGCTGGAA CACCCACTGG AATGTTATGG CTATCGTATT GAAGAACATG ATAAACCGGG TGCATTAAAT GCCCAGGCAT TAAAAGCTGC TGGCGTGCCG CCTGGCCCAC TGTTTCAGGA ATTAAAAGCG GGCAAAACAA TCATGCTGGA AGATGGAAGG CAGATTAACG GCGCAGATTA CTTAGCTGCT CCAGTGCCAG GTAAAGCGCT CGCTATTTTC GGCGATACCG GCCCCTGCGA TGCCGCACTT GACCTGGCTA AAGGTGTCGA TGTCATGGTG CACGAAGCGA CGCTGGATAT AACCATGGAA GCCAAAGCCA ATAGTCGCGG CCATAGCTCT ACACGCCAGG CTGCGACACT AGCCCGTGAG GCTGGAGTCG GTAAGCTAAT CATTACCCAC GTCAGCTCGC GCTATGATGA CAAAGGTTGT CAGCACCTGT TACGTGAATG CAGGTCAATT TTCCCGGCGA CTGAACTAGC GAATGATTTC ACCGTGTTTA ACGTTTAA
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Protein sequence | MELIFLGTSA GVPTRTRNVT AILLNLQHPT QSGLWLFDCG EGTQHQLLHT AFNPGKLDKI FISHLHGDHL FGLPGLLCSR SMSGIIQPLT IYGPQGIREF VETALRISGS WTDYPLEIVE IGAGEILDDG LRKVTAYPLE HPLECYGYRI EEHDKPGALN AQALKAAGVP PGPLFQELKA GKTIMLEDGR QINGADYLAA PVPGKALAIF GDTGPCDAAL DLAKGVDVMV HEATLDITME AKANSRGHSS TRQAATLARE AGVGKLIITH VSSRYDDKGC QHLLRECRSI FPATELANDF TVFNV
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