Gene SbBS512_E2625 details

Gene Information

• Locus tag: SbBS512_E2625
• Symbol: glpC
• ID: 6272017
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: +
• Start bp: 2427724
• End bp: 2428914
• Gene Length: 1191 bp
• Protein Length: 396 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 641726594
• Product: sn-glycerol-3-phosphate dehydrogenase subunit C
• Protein accession: YP_001881074
• Protein GI: 187732352
• COG category: [C] Energy production and conversion
• COG ID: [COG0247] Fe-S oxidoreductase
• TIGRFAM ID: [TIGR03379] glycerol-3-phosphate dehydrogenase, anaerobic, C subunit

Plasmid Coverage information

• Num covering plasmid clones: 39
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACGACA CCAGCTTCGA AAACTGCATT AAGTGCACCG TCTGCACCAC CGCCTGCCCG 
GTGAGCCGGG TGAATCCCGG TTATCCAGGG CCAAAACAAG CCGGGCCGGA TGGCGAGCGT 
CTGCGTTTGA AAGATGGCGC ACTGTATGAC GAGGCGCTGA AATATTGCAT CAACTGCAAA 
CGTTGTGAAG TCGCCTGCCC GTCCGATGTG AAGATTGGCG ATATTATCCA GCGCGCGCGG 
GCAAAATATG ACACCACGCG CCCGTCGCTG CGTAATTTTG TGTTGAGTCA TACCGACCTG 
ATGGGTAGCG TTTCCACGCC GTTCGCACCA ATCGTCAACA CCGCTACCTC GCTGAAACCG 
GTGCGGCAGC TGCTTGATGC GGCGTTAAAA ATCGATCATC GTCGCACGCT ACCGAAATAC 
TCCTTCGGCA CGTTCCGTCG CTGGTATCGC AGCATAGCGG CTCAGCAAGC ACAATATAAA 
GACCAGGTCG CTTTCTTTCA CGGCTGCTTC GTTAACTACA ACCATCCGCA GTTAGGTAAA 
GATTTAATTA AAGTGCTCAA CGCAATGGGT ACCGGTGTAC AACTGCTCAG CAAAGAAAAA 
TGCTGCGGCG TACCGCTAAT CGCCAACGGC TTTACCGATA AAGCACGCAA ACAGGCAATT 
ACGAATGTAG AGTCGATCCG CGAAGCTGTG GGAGTAAAAG GCATTCCGGT GATTGCCACC 
TCCTCAACCT GTACATTTGC CCTGCGCGAC GAATACCCGG AAGTGCTGAA TGTCGACAAC 
AAAGGCTTGC GCGATCATAT CGAACTGGCA ACCCGCTGGC TGTGGCGCAA GCTGGACGAA 
GGCAAAACGT TACCGCTGAA ACCGCTGCCG CTGAAAGTGG TTTATCACAC TCCGTGCCAT 
ATGGAAAAAA TGGGCTGGAC GCTCTACACC CTGGAGCTGT TGCGTAAAAT CCCGGGGCTT 
GAGTTAACGG TGCTGGATTC CCAGTGCTGC GGTATTGCGG GTACTTACGG TTTCAAAAAA 
GAGAACTACC CCACCTCACA AGCCATCGGC GCACCACTGT TCCGCCAGAT AGAAGAAAGC 
GGCGCAGATC TGGTGGTCAC CGACTGCGAA ACCTGTAAAT GGCAGATTGA GATGTCCACA 
AGTCTTCGCT GCGAACATCC GATTACGCTA CTGGCCCAGG CGCTGGCTTA A 

 

Protein sequence

MNDTSFENCI KCTVCTTACP VSRVNPGYPG PKQAGPDGER LRLKDGALYD EALKYCINCK 
RCEVACPSDV KIGDIIQRAR AKYDTTRPSL RNFVLSHTDL MGSVSTPFAP IVNTATSLKP 
VRQLLDAALK IDHRRTLPKY SFGTFRRWYR SIAAQQAQYK DQVAFFHGCF VNYNHPQLGK 
DLIKVLNAMG TGVQLLSKEK CCGVPLIANG FTDKARKQAI TNVESIREAV GVKGIPVIAT 
SSTCTFALRD EYPEVLNVDN KGLRDHIELA TRWLWRKLDE GKTLPLKPLP LKVVYHTPCH 
MEKMGWTLYT LELLRKIPGL ELTVLDSQCC GIAGTYGFKK ENYPTSQAIG APLFRQIEES 
GADLVVTDCE TCKWQIEMST SLRCEHPITL LAQALA