Gene SbBS512_E2548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E2548 
Symbol 
ID6271979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand+ 
Start bp2350393 
End bp2351070 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content52% 
IMG OID641726530 
Productputative hydroxylase 
Protein accessionYP_001881010 
Protein GI187731661 
COG category[S] Function unknown 
COG ID[COG3128] Uncharacterized iron-regulated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGTACC ACATTCCCGG CGTGTTATCG CCACAGGACG TCGCTCGTTT TCGCGAACAA 
CTGGAACAAG CCGAATGGGT GGATGGACGC GTCACCACCG GCGCACAAGG TGCGCAAGTT 
AAGAACAATC AACAGGTAGA CACCCGCAGC ACGTTATACG CCGCCCTGCA AAATGAGGTG 
CTGAACGCGG TTAACCAACA TGCTTTATTC TTTGCCGCGG CCTTGCCGCG TACCCTTTCC 
ACGCCGCTGT TTAATCGCTA TCAGAACAAT GAAACCTATG GTTTTCATGT GGATGGCGCA 
GTACGCAGCC ATCCACAAAG CGGCTGGATG CGCACTGACC TTTCTGCCAC GCTGTTTTTA 
AGCGATCCAC AAAGCTACGA CGGCGGCGAA CTGGTCGTTA ATGACACCTT CGGACAACAT 
CGGGTAAAAC TCCCGGCAGG TGATCTCGTG TTGTATCCCT CCAGCAGCCT GCATTGCGTG 
ACACCCGTAA CCCGCGGCGT ACGAGTGGCA TCATTTATGT GGATCCAGTC GATGATCCGC 
GATGATAAAA AGCGCGCCAT GCTGTTTGAA CTAGACAAAA ATATTCAGTC GCTGAAAAGC 
CGCTATGGTG AAAATGAAGA GATCCTGTCG CTGCTCAATC TTTATCATAA TCTGCTGCGG 
GAATGGTCGG AGATCTGA
 
Protein sequence
MMYHIPGVLS PQDVARFREQ LEQAEWVDGR VTTGAQGAQV KNNQQVDTRS TLYAALQNEV 
LNAVNQHALF FAAALPRTLS TPLFNRYQNN ETYGFHVDGA VRSHPQSGWM RTDLSATLFL 
SDPQSYDGGE LVVNDTFGQH RVKLPAGDLV LYPSSSLHCV TPVTRGVRVA SFMWIQSMIR 
DDKKRAMLFE LDKNIQSLKS RYGENEEILS LLNLYHNLLR EWSEI