Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E2538 |
Symbol | glnP |
ID | 6272627 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 2339593 |
End bp | 2340252 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641726522 |
Product | glutamine ABC transporter permease protein |
Protein accession | YP_001881002 |
Protein GI | 187730568 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00000000998158 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGTTTG ACTGGAGTGC CATCTGGCCT GCCATTCCGC TTCTGATTGA AGGTGCCAAA ATGACCCTGT GGATTTCGGT CCTCGGTCTG GCTGGCGGTC TGGTAATCGG ATTGCTGGCA GGTTTTGCAC GCACCTTCGG TGGTTGGATA GCCAACCACG TCGCGCTGGT CTTTATTGAA GTGATCCGCG GCACACCTAT CGTCGTCCAG GTGATGTTTA TCTATTTCGC CCTGCCGATG GCGTTTAACG ACTTACGCAT CGACCCATTT ACTGCGGCGG TGGTCACCAT CATGATCAAC TCCGGCGCGT ACATTGCGGA AATCACGCGT GGTGCGGTGC TGTCTATTCA CAAAGGTTTT CGTGAAGCAG GACTGGCGCT CGGTCTTTCA CGTTGGGAAA CCATTCGCTA CATCATTTTA CCGCTGGCAC TGCGTCGTAT GCTGCCGCCG CTGGGTAACC AGTGGATCAT CAGCATTAAA GACACCTCGC TGTTTATTGT TATCGGCGTG GCGGAACTGA CCCGTCAGGG GCAAGAAATT ATTGCCGGTA ACTTCCGCGC CCTTGAGATC TGGAGCGCCG TGGCGGTGTT CTATCTGATT ATTACCCTGG TGCTGAGCTT TATTCTGCGT CGTCTGGAAA GAAGGATGAA AATCCTGTGA
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Protein sequence | MQFDWSAIWP AIPLLIEGAK MTLWISVLGL AGGLVIGLLA GFARTFGGWI ANHVALVFIE VIRGTPIVVQ VMFIYFALPM AFNDLRIDPF TAAVVTIMIN SGAYIAEITR GAVLSIHKGF REAGLALGLS RWETIRYIIL PLALRRMLPP LGNQWIISIK DTSLFIVIGV AELTRQGQEI IAGNFRALEI WSAVAVFYLI ITLVLSFILR RLERRMKIL
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