| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E2510 |
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| Symbol | rimO |
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| ID | 6268649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 2307419 |
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| End bp | 2308744 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641726497 |
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| Product | ribosomal protein S12 methylthiotransferase |
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| Protein accession | YP_001880977 |
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| Protein GI | 187730809 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.105116 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAAG TAACTCCCCA GCCGAAAATC GGCTTTGTTT CCCTTGGCTG TCCGAAAAAC
CTTGTCGATT CAGAGCGTAT TCTCACCGAA CTCCGCACTG AAGGTTATGA CGTGGTACCG
AGCTATGACG ATGCGGACAT GGTGATCGTC AACACCTGCG GCTTTATTGA CAGCGCGGTA
CAAGAATCAC TGGAAGCCAT TGGTGAAGCG TTGAATGAAA ACGGCAAGGT AATTGTGACC
GGTTGTCTGG GGGCAAAAGA AGATCAGATC CGCGAAGTCC ACCCGAAAGT GCTGGAAATC
ACCGGGCCTC ATAGCTATGA GCAGGTTCTG GAGCACGTTC ATCACTACGT GCCAAAACCG
AAACACAACC CATTCCTGAG CCTGGTGCCA GAACAAGGTG TGAAACTGAC GCCGCGTCAT
TATGCCTATC TGAAAATTTC GGAAGGCTGT AATCACCGCT GCACCTTCTG CATTATTCCG
TCTATGCGCG GCGACCTGGT GAGCCGTCCG ATTGGCGAAG TGTTAAGTGA AGCGAAACGT
CTGGTAGATG CGGGCGTTAA AGAGATTCTG GTGATCTCGC AGGATACTTC CGCCTATGGC
GTTGATGTTA AACATCGTAC TGGCTTCCAC AACGGCAAGC CGGTAAAAAC CAGCATGGTC
AGCCTGTGCG AACAGTTATC GAAACTGGGG ATCTGGACAC GTCTGCACTA CGTTTACCCT
TATCCGCATG TGGACGACGT CATCCCACTG ATGGCAGAAG GCAAAATCCT GCCGTATCTG
GACATTCCGT TGCAGCACGC CAGCCCGCGC ATTCTCAAAC TGATGAAGCG TCCGGGTTCT
GTAGATCGCC AACTGGCGCG CATCAAACAG TGGCGCGAAA TCTGCCCGGA ACTGACCCTA
CGCTCAACCT TTATTGTCGG CTTCCCTGGC GAGACAGAAG AAGATTTCCA GATGCTACTC
GACTTCCTGA AAGAAGCGCG TCTGGATCGC GTTGGCTGCT TTAAATACAG CCCGGTTGAA
GGTGCAGACG CCAATGCCCT GCCTGACCAG GTTCCGGAAG AAGTTAAAGA AGAACGCTGG
AACCGTTTCA TGCAGCTGCA GCAGCAGATT TCCGCCGAGC GCCTGCAAGA GAAAGTGGGC
CGTGAAATTC TGGTGATTAT CGACGAAGTG GACGAAGAAG GCGCGATTGG TCGCAGCATG
GCAGATGCAC CGGAAATCGA CGGCGCGGTT TATCTCAATG GTGAAACCAA CGTTAAGCCG
GGTGATATCC TGCGTGTGAA AGTCGAGCAC GCCGATGAGT ACGATTTGTG GGGTAGCCGG
GTTTAA
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| Protein sequence | MSKVTPQPKI GFVSLGCPKN LVDSERILTE LRTEGYDVVP SYDDADMVIV NTCGFIDSAV
QESLEAIGEA LNENGKVIVT GCLGAKEDQI REVHPKVLEI TGPHSYEQVL EHVHHYVPKP
KHNPFLSLVP EQGVKLTPRH YAYLKISEGC NHRCTFCIIP SMRGDLVSRP IGEVLSEAKR
LVDAGVKEIL VISQDTSAYG VDVKHRTGFH NGKPVKTSMV SLCEQLSKLG IWTRLHYVYP
YPHVDDVIPL MAEGKILPYL DIPLQHASPR ILKLMKRPGS VDRQLARIKQ WREICPELTL
RSTFIVGFPG ETEEDFQMLL DFLKEARLDR VGCFKYSPVE GADANALPDQ VPEEVKEERW
NRFMQLQQQI SAERLQEKVG REILVIIDEV DEEGAIGRSM ADAPEIDGAV YLNGETNVKP
GDILRVKVEH ADEYDLWGSR V
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