Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E2500 |
Symbol | |
ID | 6273110 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 2298119 |
End bp | 2299327 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641726488 |
Product | transporter, major facilitator family |
Protein accession | YP_001880968 |
Protein GI | 187733545 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0738] Fucose permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGTAA ATTCTTCACG TAATGCATTG AAACGCCGAA CCTGGGCGCT GTTTATGTTC TTCTTTTTGC CAGGCCTGTT AATGGCGTCC TGGGCAACCC GTACGCCTGC TATCCGCGAT ATTCTCTCTG TCTCGATCGC TGAAATGGGC GGTGTTCTCT TTGGTCTGTC GATCGGTTCG ATGAGCGGTA TTCTCTGCTC GGCGTGGTTA GTGAAACGCT TTGGGACACG TAATGTCATC CTGGTCACGA TGTCCTGCGC ATTGATCGGG ATGATGATAT TAAGTCTGGC ACTCTGGCTG ACATCGCCCC TGCTCTTTGC CGTTGGTCTC GGCGTCTTTG GGGCAAGTTT TGGTTCTGCG GAAGTGGCGA TAAACGTTGA AGGTGCCGCC GTTGAGCGAG AAATGAATAA AACGGTTTTG CCGATGATGC ACGGTTTTTA TAGCCTGGGC ACGCTGGCAG GCGCTGGTGT CGGGATGGCA CTGACGGCCT TTGGCGTTCC GGCAACGGTG CACATTTTAT TGGCGGCGCT GGTAGGTATC GCGCCTATTT ATATCGCCAT TCAGGCAATC CCTGACGGTA CGGGCAAAAA TGCTGCCGAT GGCACCCAGC ATGGCGAAAA AGGCATTCCT TTTTATCGCG ATATCCAGTT GCTGTTGATT GGTGTTGTAG TGCTGGCGAT GGCCTTTGCC GAAGGTTCTG CCAACGACTG GTTACCCTTA TTAATGGTTG ACGGTCACGG TTTTAGCCCT ACTTCCGGCT CGCTGATTTA TGCCGGTTTT ACCCTGGGGA TGACCGTTGG ACGCTTCACT GGCGGTTGGT TCATCGACCG TTACAGTCGC GTTGCCGTGG TTCGGGCCAG TGCACTAATG GGGGCGTTGG GTATTGGGCT GATTATTTTT GTCGATAGCG CCTGGGTCGC TGGGGTGTCT GTTGTACTCT GGGGACTGGG TGCCTCGCTG GGCTTCCCGC TGACCATTTC TGCCGCCAGC GATACCGGCC CCGATGCACC AACCCGCGTC AGTGTGGTAG CAATGACCGG TTATCTGGCT TTCCTCGTCG GGCCGCCGCT GCTGGGCTAT CTCGGCGAAC ATTATGGATT ACGTAGTGCA ATGCTGGTTG TACTGGCGCT GGTTATTCTC GCGGCTATTG TCGCGAAAGC CGTCGCCAAA CCCGATACCA AAACGCAGAC GGCGATGGAG AATAGTTGA
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Protein sequence | MTVNSSRNAL KRRTWALFMF FFLPGLLMAS WATRTPAIRD ILSVSIAEMG GVLFGLSIGS MSGILCSAWL VKRFGTRNVI LVTMSCALIG MMILSLALWL TSPLLFAVGL GVFGASFGSA EVAINVEGAA VEREMNKTVL PMMHGFYSLG TLAGAGVGMA LTAFGVPATV HILLAALVGI APIYIAIQAI PDGTGKNAAD GTQHGEKGIP FYRDIQLLLI GVVVLAMAFA EGSANDWLPL LMVDGHGFSP TSGSLIYAGF TLGMTVGRFT GGWFIDRYSR VAVVRASALM GALGIGLIIF VDSAWVAGVS VVLWGLGASL GFPLTISAAS DTGPDAPTRV SVVAMTGYLA FLVGPPLLGY LGEHYGLRSA MLVVLALVIL AAIVAKAVAK PDTKTQTAME NS
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