| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E2477 |
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| Symbol | potF |
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| ID | 6269025 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 2279599 |
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| End bp | 2280711 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641726468 |
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| Product | putrescine transporter subunit: periplasmic-binding component of ABC superfamily |
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| Protein accession | YP_001880949 |
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| Protein GI | 187731226 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 0.996224 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCGCCT TAAATAAAAA ATGGCTTTCG GGTCTGGTTG CGGGTGCTCT GATGGCCGTC
TCTGTCGGCA CGCTCGCGGC TGAACAAAAA ACACTCCACA TTTATAACTG GTCTGATTAT
ATCGCCCCTG ACACGGTGGC CAATTTTGAA AAAGAAACCG GTATTAAAGT CGTCTACGAT
GTTTTCGACT CTAACGAAGT ACTGGAAGGC AAATTAATGG CGGGTAGCAC CGGCTTTGAC
TTGGTGGTTC CATCTGCCAG CTTTCTTGAA CGCCAGTTGA CTGCGGGAGT TTTCCAGCCG
CTGGACAAAA GCAAATTGCC GGAGTGGAAG AATCTCGACC CGGAGCTGCT GAAGCTGGTC
GCCAAACACG ATCCCGACAA TAAATTTGCT ATGCCCTATA TGTGGGCGAC GACCGGGATT
GGCTATAACG TTGATAAAGT TAAAGCTGTG CTGGGCGAAA ACGCGCCCGT CGATAGCTGG
GACTTGATCC TCAAACCTGA AAATCTGGAA AAACTGAAAA GCTGCGGTGT CTCTTTCCTG
GATGCGCCAG AAGAAGTTTT TGCTACCGTG TTGAATTATC TCGGCAAAGA TCCCAACAGC
ACTAAAGCGG ATGATTACAC CGGACCGGCA ACCGATCTGC TGTTAAAGCT GCGCCCGAAC
ATTCGTTATT TCCATTCATC TCAATACATT AACGACCTGG CAAACGGCGA TATTTGCGTC
GCTATCGGCT GGGCAGGTGA TGTCTGGCAG GCGTCAAACC GCGCGAAGGA AGCGAAGAAT
GGAGTGAATG TCTCGTTCTC GATTCCAAAA GAAGGGGCGA TGGCGTTCTT TGATGTATTC
GCCATGCCTG CGGATGCCAA AAACAAAGAC GAAGCCTATC AGTTCCTGAA TTACCTGCTG
CGCCCGGATG TAGTAGCGCA TATTTCCGAC CATGTGTTCT ATGCCAACGC CAATAAAGCA
GCCACGCCGC TGGTGAGTGC GGAAGTCCGT GAGAACCCGG GTATTTATCC TCCGGCGGAC
GTTCGTGCGA AGCTATTCAC TCTGAAAGTA CAGGATCCGA AAATCGACCG TGTGCGCACC
CGCGCGTGGA CCAAAGTGAA GAGCGGAAAA TAA
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| Protein sequence | MTALNKKWLS GLVAGALMAV SVGTLAAEQK TLHIYNWSDY IAPDTVANFE KETGIKVVYD
VFDSNEVLEG KLMAGSTGFD LVVPSASFLE RQLTAGVFQP LDKSKLPEWK NLDPELLKLV
AKHDPDNKFA MPYMWATTGI GYNVDKVKAV LGENAPVDSW DLILKPENLE KLKSCGVSFL
DAPEEVFATV LNYLGKDPNS TKADDYTGPA TDLLLKLRPN IRYFHSSQYI NDLANGDICV
AIGWAGDVWQ ASNRAKEAKN GVNVSFSIPK EGAMAFFDVF AMPADAKNKD EAYQFLNYLL
RPDVVAHISD HVFYANANKA ATPLVSAEVR ENPGIYPPAD VRAKLFTLKV QDPKIDRVRT
RAWTKVKSGK
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