Gene SbBS512_E2450 details

Gene Information

• Locus tag: SbBS512_E2450
• Symbol: macB
• ID: 6271855
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: -
• Start bp: 2251450
• End bp: 2253396
• Gene Length: 1947 bp
• Protein Length: 648 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 641726442
• Product: macrolide transporter ATP-binding /permease protein
• Protein accession: YP_001880923
• Protein GI: 187733708
• COG category: [V] Defense mechanisms
• COG ID: [COG0577] ABC-type antimicrobial peptide transport system, permease component; [COG1136] ABC-type antimicrobial peptide transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.0569677
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGCCTT TGCTCGAATT AAAGGATATT CGTCGCAGCT ATCCTGCCGG TGATGAGCAG 
GTTGAGGTGC TGAAGGGCAT CACCCTCGAT ATTTATGCCG GTGAGATGGT AGCGATTGTT 
GGCGCTTCAG GTTCCGGTAA ATCGACCCTG ATGAATATTC TCGGCTGTCT GGATAAGGCC 
ACCAGCGGCA CCTATCGCGT CGCCGGTCAG GATGTTGCCA CACTGGACGC CGATGCGCTG 
GCGCAACTGC GCCGCGAGCA TTTCGGCTTT ATTTTCCAGC GTTACCATTT ACTTTCGCAT 
TTAACCGCCG AGCAGAACGT TGAAGTACCC GCCGTCTATG CCGGTCTTGA GCGGAAACAG 
CGGCTGCTTC GCGCCCAGGA GTTACTGCAA CGACTGGGGC TGGAAGACCG TACAGAGTAT 
TATCCGGCAC AGCTTTCGGG TGGTCAGCAA CAGCGCGTCA GCATCGCGCG GGCATTGATG 
AACGGCGGTC AGGTAATTCT TGCCGATGAA CCAACCGGCG CACTGGACAG CCATTCTGGC 
GAAGAGGTGA TGGCGATCCT GCATCAGCTG CGCGATCGCG GGCATACGGT GATTATCGTC 
ACCCACGATC CGCAGGTCGC TGCTCAGGCC GAGCGGGTGA TCGAAATTCG CGACGGCGAA 
ATTGTGCGCA ATCCTCCCGC CATTGAAAAA GTGAATGTTG CTGGCGGGAC GGAGCCTGTT 
GTCAACACGG TGTCTGGCTG GCGGCAGTTT GTCAGCGGTT TTAACGAGGC GCTGACGATG 
GCATGGCGGG CGCTGGCAGC GAATAAAATG CGTACTTTAC TGACCATGCT GGGGATTATT 
ATCGGTATTG CGTCGGTGGT TTCCATTGTC GTGGTGGGTG ACGCCGCCAA ACAAATGGTG 
CTGGCGGATA TTCGTTCTAT TGGTACGAAT ACTATTGATG TCTATCCCGG GAAAGATTTT 
GGCGATGACG ATCCGCAATA TCAGCAGGCG CTGAAGTACG ACGACTTAAT CGCCATCCAA 
AAACAACCGT GGGTCGCCTC AGCCACACCT GCCGTCTCGC AAAACCTGCG CCTGCGTTAT 
AACAATGTTG ATGTTGCTGC CAGTGCCAAT GGCGTGAGCG GCGATTATTT TAATGTCTAT 
GGCATGACCT TCAGTGAAGG AAACACCTTT AATCAGGAGC AGCTGAACGG TCGTGCGCAG 
GTCGTGGTTC TCGACAGTAA TACTCGCCGC CAGCTTTTCC CCCATAAAGC AGATGTGGTT 
GGCGAGGTGA TTCTGGTCGG CAATATGCCC GCCAGAGTCA TTGGTGTGGC GGAAGAAAAA 
CAGTCGATGT TTGGTAGCAG TAAAGTGCTG CGTGTCTGGC TACCTTACAG CACGATGTCC 
GGGCGAGTTA TGGGCCAGTC GTGGCTGAAC TCCATTACTG TCAGGGTAAA AGAAGGATTT 
GACAGCGCCG AGGCGGAACA GCAACTCACG CGTTTACTTT CACTGCGCCA CGGAAAGAAG 
GATTTCTTTA CCTGGAACAT GGACGGCGTC TTGAAAACTG TTGAAAAGAC CACACGTACT 
TTACAACTGT TTCTGACGCT GGTGGCGGTG ATTTCGCTGG TGGTGGGCGG TATTGGTGTA 
ATGAATATTA TGCTGGTGTC AGTGACCGAG CGGACGCGGG AAATTGGCAT TCGCATGGCT 
GTAGGTGCGC GAGCAAGCGA TGTTTTGCAA CAGTTCCTGA TCGAAGCCGT ACTGGTTTGC 
CTGGTCGGTG GCGCGTTGGG AATAACGCTG TCACTGTTAA TTGCTTTCAC CTTGCAGCTT 
TTCTTACCCG GCTGGGAGAT TGGTTTTTCA CCGTTGGCAC TGCTGCTGGC GTTTCTCTGC 
TCGACGGCCA CCGGGATTTT ATTTGGATGG TTACCCGCAC GAAATGCGGC ACGACTGGAT 
CCAGTAGATG CTCTGGCACG AGAGTAA 

 

Protein sequence

MTPLLELKDI RRSYPAGDEQ VEVLKGITLD IYAGEMVAIV GASGSGKSTL MNILGCLDKA 
TSGTYRVAGQ DVATLDADAL AQLRREHFGF IFQRYHLLSH LTAEQNVEVP AVYAGLERKQ 
RLLRAQELLQ RLGLEDRTEY YPAQLSGGQQ QRVSIARALM NGGQVILADE PTGALDSHSG 
EEVMAILHQL RDRGHTVIIV THDPQVAAQA ERVIEIRDGE IVRNPPAIEK VNVAGGTEPV 
VNTVSGWRQF VSGFNEALTM AWRALAANKM RTLLTMLGII IGIASVVSIV VVGDAAKQMV 
LADIRSIGTN TIDVYPGKDF GDDDPQYQQA LKYDDLIAIQ KQPWVASATP AVSQNLRLRY 
NNVDVAASAN GVSGDYFNVY GMTFSEGNTF NQEQLNGRAQ VVVLDSNTRR QLFPHKADVV 
GEVILVGNMP ARVIGVAEEK QSMFGSSKVL RVWLPYSTMS GRVMGQSWLN SITVRVKEGF 
DSAEAEQQLT RLLSLRHGKK DFFTWNMDGV LKTVEKTTRT LQLFLTLVAV ISLVVGGIGV 
MNIMLVSVTE RTREIGIRMA VGARASDVLQ QFLIEAVLVC LVGGALGITL SLLIAFTLQL 
FLPGWEIGFS PLALLLAFLC STATGILFGW LPARNAARLD PVDALARE