Gene SbBS512_E2420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E2420 
SymbolaroA 
ID6271178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp2216364 
End bp2217647 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content50% 
IMG OID641726415 
Product3-phosphoshikimate 1-carboxyvinyltransferase 
Protein accessionYP_001880897 
Protein GI187733570 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0128] 5-enolpyruvylshikimate-3-phosphate synthase 
TIGRFAM ID[TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000492691 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATCCC TGACGTTACA ACCCATCGCT CGTGTCGATG GCACTATTAA TCTGCCCGGT 
TCCAAGAGCG TTTCTAACCG CGCTTTATTG CTGGCGGCAT TAGCACACGG CAAAACAGTA
TTAACCAATC TGCTGGATAG CGATGACGTG CGCCATATGC TGAATGCATT AACAGCGTTA
GGGGTAAGCT ATACGCTTTC AGCCGATCGT ACGCGTTGCG AAATTATCGG TAACGGCGGT
CCATTACACG CAGAAGGTGC CCTGGAGTTG TTCCTCGGTA ACGCCGGAAC GGCAATGCGT
CCGCTGGCGG CAGCTCTTTG TCTGGGTAGC AATGATATTG TGCTGACCGG TGAGCCGCGT
ATGAAAGAAC GCCCGATTGG TCATCTGGTG GATGCGCTGC GCCTGGGCGG GGCGAAGATC
ACTTACCTGG AACAAGAAAA TTATCCGCCG TTGCGTTTAC AGGGCGGCTT TACTGGCGGC
AACGTTGACG TTGATGGCTC CGTTTCCAGC CAATTCCTCA CCGCACTGTT AATGACTGCG
CCTCTTGCGC CGGAAGATAC GGTGATTCGT ATTAAAGGCG ATCTGGTTTC TAAACCTTAT
ATCGACATCA CACTCAATCT GATGAAGACG TTTGGTGTTG AAATTGAAAA TCAGCACTAT
CAACAATTTG TCGTAAAAGG CGGACAGTCT TATCAGTCTC CGGGTACTTA TTTGGTCGAA
GGCGATGCAT CTTCGGCTTC TTACTTTCTG GCAGCAGCAG CAATCAAAGG CGGCACTGTA
AAAGTGACCG GTATTGGACG TAACAGTATG CAGGGTGATA TTCGCTTTGC TGATGTGCTG
GAAAAAATGG GCGCGACCAT TTGCTGGGGC GATGATTATA TTTCCTGCAC GCGTGGTGAA
CTGAACGCTA TTGATATGGA TATGAACCAT ATTCCCGATG CGGCGATGAC CATTGCCACG
GCGGCGTTAT TTGCAAAAGG CACCACCACG CTGCGCAATA TCTATAACTG GCGTGTTAAA
GAAACCGATC GCCTGTTTGC GATGGCAACA GAACTGCGTA AAGTCGGTGC GGAAGTAGAA
GAGGGGCACG ATTACATTCG TATCACTCCA CCGGAAAAAC TGAACTTTGC CGAGATCGCG
ACATACAATG ATCACCGGAT GGCGATGTGT TTCTCGCTGG TGGCGTTGTC AGATACACCA
GTGACGATTC TTGATCCCAA ATGTACGGCC AAAACATTTC CGGATTATTT CGAGCAGTTG
GCGCGGATTA GCCAGGCAGC CTGA
 
Protein sequence
MESLTLQPIA RVDGTINLPG SKSVSNRALL LAALAHGKTV LTNLLDSDDV RHMLNALTAL 
GVSYTLSADR TRCEIIGNGG PLHAEGALEL FLGNAGTAMR PLAAALCLGS NDIVLTGEPR
MKERPIGHLV DALRLGGAKI TYLEQENYPP LRLQGGFTGG NVDVDGSVSS QFLTALLMTA
PLAPEDTVIR IKGDLVSKPY IDITLNLMKT FGVEIENQHY QQFVVKGGQS YQSPGTYLVE
GDASSASYFL AAAAIKGGTV KVTGIGRNSM QGDIRFADVL EKMGATICWG DDYISCTRGE
LNAIDMDMNH IPDAAMTIAT AALFAKGTTT LRNIYNWRVK ETDRLFAMAT ELRKVGAEVE
EGHDYIRITP PEKLNFAEIA TYNDHRMAMC FSLVALSDTP VTILDPKCTA KTFPDYFEQL
ARISQAA