Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E2418 |
Symbol | cmk |
ID | 6268779 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 2214576 |
End bp | 2215259 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641726413 |
Product | cytidylate kinase |
Protein accession | YP_001880895 |
Protein GI | 187732657 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0283] Cytidylate kinase |
TIGRFAM ID | [TIGR00017] cytidylate kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000000000000459306 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGGCAA TTGCCCCGGT TATTACCATT GATGGCCCAA GCGGTGCAGG GAAAGGCACC TTGTGTAAGG CTATGGCGGA AGCATTGCAA TGGCATCTGC TGGATTCGGG TGCAATTTAT CGCGTACTGG CATTGGCGGC ATTACATCAC CATGTTGATG TTGCGTCAGA AGATGCGCTG GTACCGCTGG CATCCCATCT GGATGTACGT TTTGTGTCAA CCAATGGCAA TCTGGAAGTG ATCCTCGAAG GGGAAGATGT CAGCGGCGAA ATTCGTACTC AGGAAGTGGC GAATGCGGCT TCACAAGTCG CGGCATTCCC ACGCGTTCGT GAAGCATTAT TGCGTCGCCA ACGCGCGTTT CGCGAATTAC CAGGTCTGAT TGCCGATGGC CGCGACATGG GAACGGTGGT ATTCCCTGAT GCACCAGTGA AAATTTTCCT TGACGCCTCC TCGGAAGAAC GTGCGCATCG CCGCATGCTA CAGTTGCAGG AGAAGGGCTT TAGTGTTAAC TTTGAGCGCC TTTTGGCCGA GATCAAAGAA CGCGACGACC GCGATCGTAA CCGAGCGGTA GCGCCACTGG TTCCGGCAGC CGATGCTTTA GTGTTGGATT CCACCACCTT AAGCATTGAG CAAGTGATTG AAAAAGCGCT ACAATACGCG CGCCAGAAAT TGGCTCTCGC ATAA
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Protein sequence | MTAIAPVITI DGPSGAGKGT LCKAMAEALQ WHLLDSGAIY RVLALAALHH HVDVASEDAL VPLASHLDVR FVSTNGNLEV ILEGEDVSGE IRTQEVANAA SQVAAFPRVR EALLRRQRAF RELPGLIADG RDMGTVVFPD APVKIFLDAS SEERAHRRML QLQEKGFSVN FERLLAEIKE RDDRDRNRAV APLVPAADAL VLDSTTLSIE QVIEKALQYA RQKLALA
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