| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E2387 |
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| Symbol | pncB |
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| ID | 6272878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 2178931 |
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| End bp | 2180133 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641726386 |
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| Product | nicotinate phosphoribosyltransferase |
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| Protein accession | YP_001880868 |
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| Protein GI | 187733305 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1488] Nicotinic acid phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR01514] nicotinate phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.0828745 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACAAT TCGCTTCTCC TGTTCTGCAC TCGTTGCTGG ATACAGATGC TTATAAGTTG
CATATGCAGC AAGCCGTGTT TCATCACTAT TACGATGTGC ATGTCGCGGC GGAGTTTCGT
TGCCGAGGTG ACGATCTGCT GGGTATTTAT GCCGATGCTA TTCGTGAACA GATTCAGGCG
ATGCAGCACC TGCGCCTGCA GGATGATGAA TATCAGTGGC TCTCTGCCCT GCCTTTCTTT
AAGGCCGACT ATCTTAACTG GTTACGCGAA TTCCGCTTTA ACCCGGAACA AGTCACCGTG
TCCAACGATA ATGGCAAGCT GGATATTCGC TTAAGCGGTC CGTGGCGTGA AGTCATCCTC
TGGGAAGTTC CTTTGCTGGC GGTTATCAGT GAAATGGTAC ATCGCTATCG CTCACCGCAG
GCCGACGTTG CGCAAGCCCT CGACACGCTG GAAAGCAAAT TAGTCGACTT CTCGGCGTTA
ACCGCCGGTC TTGATATGTC GCGCTTCCAT CTGATGGATT TTGGCACCCG TCGCCGTTTT
TCTCGCGAAG TACAAGAAAC CATCGTTAAG CGTCTGCAAC AGGAATCCTG GTTCGTGGGC
ACCAGCAACT ACGATCTGGC GCGTCGGCTT TCCCTCACGC CGATGGGAAC ACAGGCGCAC
GAATGGTTCC AGGCACATCA GCAAATCAGC CCGGACCTAG CCAACAGCCA GCGAGCTGCA
CTTGCTGCCT GGCTGGAAGA ATATCCCGAC CAACTTGGCA TTGCATTAAC CGACTGCATC
ACTATGGATG CTTTCCTGCG TGATTTCGGT GTCGAGTTCG CCAGTCGGTA TCAGGGCCTG
CGTCATGACT CTGGCGACCC GGTTGAATGG GGTGAAAAAG CCATTGCACA TTATAAAAAG
CTGGGAATTG ATCCACAGAG TAAAACGCTG GTTTTCTCTG ACAATCTGGA TTTACGCAAA
GCGGTTGAGC TATACCGCCA CTTCTCTTCC CGCGTGCAAT TAAGTTTTGG TATTGGGACT
CGCCTGACCT GCGATATCCC CCAGGTAAAA CCCCTGAATA TTGTGATTAA GTTGGTAGAG
TGTAACGGTA AACCGGTGGC GAAACTTTCT GACAGCCCTG GCAAAACTAT CTGCCATGAT
AAAGCGTTTG TTCGGGCGCT GCGCAAAGCG TTCGACCTTC CGCATATTAA AAAAGCCAGT
TAA
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| Protein sequence | MTQFASPVLH SLLDTDAYKL HMQQAVFHHY YDVHVAAEFR CRGDDLLGIY ADAIREQIQA
MQHLRLQDDE YQWLSALPFF KADYLNWLRE FRFNPEQVTV SNDNGKLDIR LSGPWREVIL
WEVPLLAVIS EMVHRYRSPQ ADVAQALDTL ESKLVDFSAL TAGLDMSRFH LMDFGTRRRF
SREVQETIVK RLQQESWFVG TSNYDLARRL SLTPMGTQAH EWFQAHQQIS PDLANSQRAA
LAAWLEEYPD QLGIALTDCI TMDAFLRDFG VEFASRYQGL RHDSGDPVEW GEKAIAHYKK
LGIDPQSKTL VFSDNLDLRK AVELYRHFSS RVQLSFGIGT RLTCDIPQVK PLNIVIKLVE
CNGKPVAKLS DSPGKTICHD KAFVRALRKA FDLPHIKKAS
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