| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E2359 |
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| Symbol | ompA |
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| ID | 6269493 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 2147054 |
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| End bp | 2148094 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641726363 |
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| Product | outer membrane protein A |
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| Protein accession | YP_001880845 |
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| Protein GI | 187730326 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000000000044176 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGA CAGCTATCGC GATTGCAGTG GCACTGGCTG GTTTCGCTAC CGTAGCGCAG
GCCGCTCCGA AAGATAACAC CTGGTACACT GGTGCTAAAC TGGGCTGGTC CCAGTACCAT
GACACTGGTT TCATCAACAA CAATGGCCCG ACCCATGAAA ACCAACTGGG CGCTGGTGCT
TTTGGTGGTT ACCAGGTTAA CCCGTATGTT GGCTTTGAAA TGGGTTACGA CTGGTTAGGT
CGTATGCCGT ACAAAGGCAG CGTTGAAAAC GGTGCATACA AAGCTCAGGG CGTTCAACTG
ACCGCTAAAC TGGGTTACCC AATCACTGAC GACCTGGACA TCTACACTCG TCTGGGTGGT
ATGGTATGGC GTGCAGACAC TAAATCCAAC GTTTATGGTA AAAACCACGA CACCGGCGTT
TCTCCGGTCT TCGCTGGCGG TGTTGAGTAC GCGATCACTC CTGAAATCGC TACCCGTCTG
GAATACCAGT GGACCAACAA CATCGGTGAC GCACACACCA TCGGCACTCG TCCGGACAAC
GGCATGCTGA GCCTGGGTGT TTCCTACCGT TTCGGTCAGG GCGAAGCAGC TCCAGTAGTT
GCTCCGGCTC CAGCTCCGGC ACCGGAAGTA CAGACCAAGC ACTTCACTCT GAAGTCTGAC
GTTCTGTTCA ACTTCAACAA AGCAACCCTG AAACCGGAAG GTCAGGCTGC TCTGGATCAG
CTGTACAGCC AGCTGAGCAA CTTGGATCCG AAAGACGGTT CCGTAGTTGT TCTGGGTTAC
ACCGACCGCA TCGGTTCTGA CGCTTACAAC CAGGGTCTGT CCGAGCGCCG TGCTCAGTCT
GTTGTTGATT ACCTGATCTC CAAAGGTATC CCGGCAGACA AGATCTCCGC ACGTGGTATG
GGCGAATCCA ACCCGGTTAC TGGCAACACC TGTGACAACG TGAAACAGCG TGCTGCACTG
ATCGACTGCC TGGCTCCGGA TCGTCGCGTA GAGATCGAAG TTAAAGGTAT CAAAGACGTT
GTAACTCAGC CGCAGGCTTA A
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| Protein sequence | MKKTAIAIAV ALAGFATVAQ AAPKDNTWYT GAKLGWSQYH DTGFINNNGP THENQLGAGA
FGGYQVNPYV GFEMGYDWLG RMPYKGSVEN GAYKAQGVQL TAKLGYPITD DLDIYTRLGG
MVWRADTKSN VYGKNHDTGV SPVFAGGVEY AITPEIATRL EYQWTNNIGD AHTIGTRPDN
GMLSLGVSYR FGQGEAAPVV APAPAPAPEV QTKHFTLKSD VLFNFNKATL KPEGQAALDQ
LYSQLSNLDP KDGSVVVLGY TDRIGSDAYN QGLSERRAQS VVDYLISKGI PADKISARGM
GESNPVTGNT CDNVKQRAAL IDCLAPDRRV EIEVKGIKDV VTQPQA
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