Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E2341 |
Symbol | hyaC |
ID | 6270555 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 2130557 |
End bp | 2131264 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641726345 |
Product | hydrogenase 1 b-type cytochrome subunit |
Protein accession | YP_001880828 |
Protein GI | 187731776 |
COG category | [C] Energy production and conversion |
COG ID | [COG1969] Ni,Fe-hydrogenase I cytochrome b subunit |
TIGRFAM ID | [TIGR02125] Ni/Fe-hydrogenase, b-type cytochrome subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.334235 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAACAGA AAAGCGACAA CGTTGTCAGC CACTATGTCT TTGAAGCGCC AGTCCGCATC TGGCACTGGT TGACGGTGTT ATGCATGGCG GTGTTGATGG TCACCGGATA CTTTATCGGC AAGCCGCTAC CTTCCGTCAG CGGCGAGGCG ACGTATCTGT TCTATATGGG CTACATCAGG TTAATTCACT TCAGCGCCGG GATGGTTTTT ACCGTGGTTT TGCTGATGCG GATCTACTGG GCTTTTGTTG GCAATCGATA CTCCCGCGAG CTGTTTATCG TGCCGGTATG GCGTAAAAGC TGGTGGCAGG GCGTGTGGTA TGAAATCCGC TGGTATCTGT TTCTGGCAAA ACGTCCGAGT GCCAATATAG GCCATAATCC CATCGCCCAG GCGGCGATGT TCGGCTATTT CCTGATGTCG GTCTTTATGA TCATCACTGG TTTTGCGCTG TACAGCGAAC ACAGCCAGTA CGCTATTTTT GCGCCGTTCC GTTATGTGGT GGAATTTTTC TACTGGACGG GTGGCAACTC AATGGACATT CACAGCTGGC ATCGGCTGGG GATGTGGCTG ATTGGCGCGT TTGTGATCGG TCATGTCTAC ATGGCGCTGC GTGAAGACAT CATGTCCGAC GACACGGTGA TCTCCACCAT GGTCAACGGC TACCGTAGCC ACAAATTTGG CAAAATAAGT AACAAGGAGT GTTCATGA
|
Protein sequence | MQQKSDNVVS HYVFEAPVRI WHWLTVLCMA VLMVTGYFIG KPLPSVSGEA TYLFYMGYIR LIHFSAGMVF TVVLLMRIYW AFVGNRYSRE LFIVPVWRKS WWQGVWYEIR WYLFLAKRPS ANIGHNPIAQ AAMFGYFLMS VFMIITGFAL YSEHSQYAIF APFRYVVEFF YWTGGNSMDI HSWHRLGMWL IGAFVIGHVY MALREDIMSD DTVISTMVNG YRSHKFGKIS NKECS
|
| |