Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E2302 |
Symbol | putP |
ID | 6272403 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 2090401 |
End bp | 2091909 |
Gene Length | 1509 bp |
Protein Length | 502 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641726314 |
Product | sodium/proline symporter |
Protein accession | YP_001880797 |
Protein GI | 187731990 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0591] Na+/proline symporter |
TIGRFAM ID | [TIGR00813] transporter, SSS family [TIGR02121] sodium/proline symporter |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCTATTA GCACACCGAT GTTGGTGACA TTTTGTGTCT ATATCTTTGG CATGATATTG ATTGGGTTTA TCGCCTGGCG ATCAACGAAA AACTTTGACG ACTATATTCT GGGCGGTCGT AGTCTTGGGC CATTTGTGAC GGCATTATCG GCGGGTGCGT CGGATATGAG CGGCTGGCTG TTAATGGGGT TGCCTGGCGC GGTTTTTCTT TCCGGGATTT CCGAAAGCTG GATCGCCATT GGCCTGACAT TAGGCGCGTG GATCAACTGG AAGCTGGTGG CCGGGCGGTT GCGTGTGCAT ACCGAATACA ATAATAACGC CTTAACATTG CCGGATTATT TCACCGGGCG TTTTGAAGAT AAAAGCCGCA TTTTGCGCAT TATCTCCGCG CTGGTTATTT TGCTGTTCTT CACCATTTAT TGCGCTTCGG GCATTGTGGC AGGCGCGCGT CTGTTTGAAA GTACCTTTGG CATGAGCTAC GAAACGGCTC TGTGGGCGGG AGCTGCGGCG ACGATCCTTT ACACCTTTAT TGGCGGTTTC CTCGCGGTGA GCTGGACTGA CACTGTACAG GCCAGCCTGA TGATTTTTGC CCTGATCCTG ACACCGGTTA TCGTCATTAT CTGTGTCGGT GGCTTTGGTG ACTCGCTGGA AGTGATCAAA CAAAAGAGCA TCGAAAACGT TGATATGCTC AAAGGTCTGA ACTTTGTTGC CATTATCTCA CTGATGGGTT GGGGGCTGGG TTACTTCGGG CAGCCGCACA TTCTGGCGCG TTTTATGGCG GCGGATTCTC ACCACAGCAT TGTCCATGCG CGTCGTATCA GTATGACCTG GATGATCCTC TGCCTGGCAG GGGCGGTGGC TGTCGGCTTC TTTGGGATTG CTTACTTTAA TGAGCACCCG GCGGTAGCAG GCGCGGTAAA CCAGAACGCC GAGCGCGTGT TTATCGAACT GGCGCAAATT CTGTTTAACC CGTGGATTGC CGGGATTCTG CTGTCGGCAA TTCTGGCGGC GGTAATGTCA ACCTTAAGTT GCCAACTGCT GGTGTGCTCC AGTGCGATTA CCGAAGATTT ATACAAAGTG TTTCTGCGTA AACATGCCAG CCAGAAAGAG CTGGTGTGGG TAGGGCGTGT GATGGTGCTG GTGGTGGCGC TGGTGGCGAT TGCGCTGGCG GCAAACCCGG AAAACCGCGT GCTGGGCTTA GTGAGCTACG CGTGGGCAGG CTTTGGCGCG GCGTTTGGTC CGGTGGTGCT GTTCTCGGTG ATGTGGTCAC GCATGACGCG TAACGGTGCA CTGGCGGGGA TGATCATCGG TGCGCTGACG GTTATCGTCT GGAAGCAGTT CGGCTGGCTG GGACTGTACG AAATTATTCC GGGCTTCATC TTCGGCAGTA TCGGGATTGT AGTGTTTAGT TTGCTGGGTA AAGCGCCGTC AGCGGCGATG CAAAAACGCT TTGCCGAGGC CGATGCGCAC TATCATTCGG CTCCGCCGTC ACGGTTGCAG GAAAGCTAA
|
Protein sequence | MAISTPMLVT FCVYIFGMIL IGFIAWRSTK NFDDYILGGR SLGPFVTALS AGASDMSGWL LMGLPGAVFL SGISESWIAI GLTLGAWINW KLVAGRLRVH TEYNNNALTL PDYFTGRFED KSRILRIISA LVILLFFTIY CASGIVAGAR LFESTFGMSY ETALWAGAAA TILYTFIGGF LAVSWTDTVQ ASLMIFALIL TPVIVIICVG GFGDSLEVIK QKSIENVDML KGLNFVAIIS LMGWGLGYFG QPHILARFMA ADSHHSIVHA RRISMTWMIL CLAGAVAVGF FGIAYFNEHP AVAGAVNQNA ERVFIELAQI LFNPWIAGIL LSAILAAVMS TLSCQLLVCS SAITEDLYKV FLRKHASQKE LVWVGRVMVL VVALVAIALA ANPENRVLGL VSYAWAGFGA AFGPVVLFSV MWSRMTRNGA LAGMIIGALT VIVWKQFGWL GLYEIIPGFI FGSIGIVVFS LLGKAPSAAM QKRFAEADAH YHSAPPSRLQ ES
|
| |