Gene SbBS512_E2302 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E2302 
SymbolputP 
ID6272403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp2090401 
End bp2091909 
Gene Length1509 bp 
Protein Length502 aa 
Translation table11 
GC content54% 
IMG OID641726314 
Productsodium/proline symporter 
Protein accessionYP_001880797 
Protein GI187731990 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG0591] Na+/proline symporter 
TIGRFAM ID[TIGR00813] transporter, SSS family
[TIGR02121] sodium/proline symporter 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTATTA GCACACCGAT GTTGGTGACA TTTTGTGTCT ATATCTTTGG CATGATATTG 
ATTGGGTTTA TCGCCTGGCG ATCAACGAAA AACTTTGACG ACTATATTCT GGGCGGTCGT
AGTCTTGGGC CATTTGTGAC GGCATTATCG GCGGGTGCGT CGGATATGAG CGGCTGGCTG
TTAATGGGGT TGCCTGGCGC GGTTTTTCTT TCCGGGATTT CCGAAAGCTG GATCGCCATT
GGCCTGACAT TAGGCGCGTG GATCAACTGG AAGCTGGTGG CCGGGCGGTT GCGTGTGCAT
ACCGAATACA ATAATAACGC CTTAACATTG CCGGATTATT TCACCGGGCG TTTTGAAGAT
AAAAGCCGCA TTTTGCGCAT TATCTCCGCG CTGGTTATTT TGCTGTTCTT CACCATTTAT
TGCGCTTCGG GCATTGTGGC AGGCGCGCGT CTGTTTGAAA GTACCTTTGG CATGAGCTAC
GAAACGGCTC TGTGGGCGGG AGCTGCGGCG ACGATCCTTT ACACCTTTAT TGGCGGTTTC
CTCGCGGTGA GCTGGACTGA CACTGTACAG GCCAGCCTGA TGATTTTTGC CCTGATCCTG
ACACCGGTTA TCGTCATTAT CTGTGTCGGT GGCTTTGGTG ACTCGCTGGA AGTGATCAAA
CAAAAGAGCA TCGAAAACGT TGATATGCTC AAAGGTCTGA ACTTTGTTGC CATTATCTCA
CTGATGGGTT GGGGGCTGGG TTACTTCGGG CAGCCGCACA TTCTGGCGCG TTTTATGGCG
GCGGATTCTC ACCACAGCAT TGTCCATGCG CGTCGTATCA GTATGACCTG GATGATCCTC
TGCCTGGCAG GGGCGGTGGC TGTCGGCTTC TTTGGGATTG CTTACTTTAA TGAGCACCCG
GCGGTAGCAG GCGCGGTAAA CCAGAACGCC GAGCGCGTGT TTATCGAACT GGCGCAAATT
CTGTTTAACC CGTGGATTGC CGGGATTCTG CTGTCGGCAA TTCTGGCGGC GGTAATGTCA
ACCTTAAGTT GCCAACTGCT GGTGTGCTCC AGTGCGATTA CCGAAGATTT ATACAAAGTG
TTTCTGCGTA AACATGCCAG CCAGAAAGAG CTGGTGTGGG TAGGGCGTGT GATGGTGCTG
GTGGTGGCGC TGGTGGCGAT TGCGCTGGCG GCAAACCCGG AAAACCGCGT GCTGGGCTTA
GTGAGCTACG CGTGGGCAGG CTTTGGCGCG GCGTTTGGTC CGGTGGTGCT GTTCTCGGTG
ATGTGGTCAC GCATGACGCG TAACGGTGCA CTGGCGGGGA TGATCATCGG TGCGCTGACG
GTTATCGTCT GGAAGCAGTT CGGCTGGCTG GGACTGTACG AAATTATTCC GGGCTTCATC
TTCGGCAGTA TCGGGATTGT AGTGTTTAGT TTGCTGGGTA AAGCGCCGTC AGCGGCGATG
CAAAAACGCT TTGCCGAGGC CGATGCGCAC TATCATTCGG CTCCGCCGTC ACGGTTGCAG
GAAAGCTAA
 
Protein sequence
MAISTPMLVT FCVYIFGMIL IGFIAWRSTK NFDDYILGGR SLGPFVTALS AGASDMSGWL 
LMGLPGAVFL SGISESWIAI GLTLGAWINW KLVAGRLRVH TEYNNNALTL PDYFTGRFED
KSRILRIISA LVILLFFTIY CASGIVAGAR LFESTFGMSY ETALWAGAAA TILYTFIGGF
LAVSWTDTVQ ASLMIFALIL TPVIVIICVG GFGDSLEVIK QKSIENVDML KGLNFVAIIS
LMGWGLGYFG QPHILARFMA ADSHHSIVHA RRISMTWMIL CLAGAVAVGF FGIAYFNEHP
AVAGAVNQNA ERVFIELAQI LFNPWIAGIL LSAILAAVMS TLSCQLLVCS SAITEDLYKV
FLRKHASQKE LVWVGRVMVL VVALVAIALA ANPENRVLGL VSYAWAGFGA AFGPVVLFSV
MWSRMTRNGA LAGMIIGALT VIVWKQFGWL GLYEIIPGFI FGSIGIVVFS LLGKAPSAAM
QKRFAEADAH YHSAPPSRLQ ES