Gene SbBS512_E2088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E2088 
Symbol 
ID6272855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp1897960 
End bp1898526 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content51% 
IMG OID641726124 
Producthypothetical protein 
Protein accessionYP_001880618 
Protein GI187730974 
COG category[S] Function unknown 
COG ID[COG1971] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000111578 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATCA CTGCTACTGT TCTTCTTGCG TTTGGTATGT CGATGGATGC ATTTGCTGCA 
TCAATCGGTA AAGGTGCCAC CCTCCATAAA CCGAAATTTT CTGAAGCATT GCGAACCGGC
CTTATTTTTG GTGCCGTCGA AACCCTGACG CCGCTGATCG GCTGGGGAAT GGGCATGTTA
GCCAGCCGGT TTGTCCTTGA ATGGAACCAC TGGATTGCGT TTGTGCTGCT GATATTCCTC
GGCGGGCGAA TGATTATTGA GGGTTTTCGT GGCGCAGATG ATGAAGATGA AGAGCCGCGC
CGTCGACACG GTTTCTGGCT ACTGGTAACC ACCGCGATTG CCACCAGCCT GGATGCCATG
GCTGTGGGTG TTGGTCTTGC TTTCCTGCAG GTCAACATTA TCGCGACCGC ATTGGCCATT
GGTTGTGCAA CCTTGATTAT GTCAACATTA GGGATGATGG TTGGTCGCTT TATCGGCTCA
ATTATTGGGA AAAAAGCGGA AATTCTCGGC GGGCTGGTAC TGATCGGCAT CGGCGTCCAG
ATCCTCTGGA CGCACTTCCA CGGTTAA
 
Protein sequence
MNITATVLLA FGMSMDAFAA SIGKGATLHK PKFSEALRTG LIFGAVETLT PLIGWGMGML 
ASRFVLEWNH WIAFVLLIFL GGRMIIEGFR GADDEDEEPR RRHGFWLLVT TAIATSLDAM
AVGVGLAFLQ VNIIATALAI GCATLIMSTL GMMVGRFIGS IIGKKAEILG GLVLIGIGVQ
ILWTHFHG