Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E2083 |
Symbol | manX |
ID | 6271866 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 1894321 |
End bp | 1895292 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641726120 |
Product | PTS system, mannose-specific IIAB component |
Protein accession | YP_001880614 |
Protein GI | 187731326 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2893] Phosphotransferase system, mannose/fructose-specific component IIA [COG3444] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB |
TIGRFAM ID | [TIGR00824] PTS system, mannose/fructose/sorbose family, IIA component [TIGR00854] PTS system, mannose/fructose/sorbose family, IIB component |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000000000444348 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCATTG CTATTGTTAT AGGCACACAT GGTTGGGCTG CAGAGCAGTT GCTTAAAACG GCAGAAATGC TGTTAGGCGA GCAGGAAAAC GTCGGCTGGA TCGATTTCGT TCCAGGTGAA AATGCCGAAA CGCTGATTGA AAAGTACAAC GCTCAGTTGG CAAAACTCGA CACCACTAAA GGCGTGCTGT TTCTCGTTGA TACATGGGGA GGCAGCCCGT TCAATGCTGC CAGCCGCATT GTCGTCGACA AAGAGCATTA TGAAGTCATT GCAGGCGTTA ACATTCCAAT GCTCGTGGAA ACGTTAATGG CTCGTGATGA TGACCCAAGC TTTGATGAAC TGGTTGCGCT GGCAGTAGAA ACAGGCCGTG AAGGCGTGAA AGCACTGAAA GCCAAACCGG TTGAAAAAGC CGCGCCAGCA CCCGCTGCCG CAGCACCAAA AGCGGCTCCA ACTCCGGCAA AACCAATGGG GCCAAACGAC TACATGGTTA TTGGCCTTGC GCGTATCGAC GACCGTCTGA TTCACGGTCA GGTCGCCACC CGCTGGACCA AAGAAACCAA TGTCTCCCGT ATTATTGTTG TTAGTGATGA AGTGGCTGCG GATACCGTTC GTAAGACACT GCTCACCCAG GTTGCACCTC CGGGCGTAAC AGCACACGTA GTTGATGTTG CCAAAATGAT TCGCGTCTAC AACAACCCGA AATATGCTGG CGAACGCGTA ATGCTGTTAT TTACCAACCC AACAGATGTA GAGCGTCTCG TTGAAGGCGG CGTGAAAATC ACCTCTGTTA ACGTCGGTGG TATGGCATTC CGTCAAGGTA AAACCCAGGT GAATAACGCG GTTTCGGTTG ATGAAAAAGA TATCGAGGCG TTCAAGAAAC TGAATGCGCG CGGTATTGAG CTGGAAGTCC GTAAGGTTTC CACCGATCCG AAACTGAAAA TGATGGATCT GATCAGCAAA ATCGATAAGT AA
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Protein sequence | MTIAIVIGTH GWAAEQLLKT AEMLLGEQEN VGWIDFVPGE NAETLIEKYN AQLAKLDTTK GVLFLVDTWG GSPFNAASRI VVDKEHYEVI AGVNIPMLVE TLMARDDDPS FDELVALAVE TGREGVKALK AKPVEKAAPA PAAAAPKAAP TPAKPMGPND YMVIGLARID DRLIHGQVAT RWTKETNVSR IIVVSDEVAA DTVRKTLLTQ VAPPGVTAHV VDVAKMIRVY NNPKYAGERV MLLFTNPTDV ERLVEGGVKI TSVNVGGMAF RQGKTQVNNA VSVDEKDIEA FKKLNARGIE LEVRKVSTDP KLKMMDLISK IDK
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