Gene SbBS512_E1997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E1997 
Symbolxth 
ID6270902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp1820983 
End bp1821789 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content53% 
IMG OID641726050 
Productexonuclease III 
Protein accessionYP_001880544 
Protein GI187730490 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value0.892579 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTTG TCTCTTTTAA TATCAACGGC CTGCGCGCCA GACCTCACCA GCTTGAAGCC 
ATCGTCGAAA AGCACCAACC GGATGTGATT GGCCTGCAGG AGACAAAAGT TCATGACGAT
ATGTTTCCGC TCGAAGAGGT GGCGAAGCTC GGCTACAACG TGTTTTATCA CGGGCAGAAA
GGCCATTATG GCGTGGCGCT GCTGACCAAA GAGACGCCGA TTGCCGTGCG TCGCGGCTTT
CCCGGTGACG ACGAAGAGGC GCAGCGGCGG ATTATTATGG CGGAAATCCC CTCACTGCTG
GGTAATGTCA CCGTGATCAA CGGTTACTTC CCGCAGGGTG AAAGCCGCGA CCATCCGATA
AAATTCCCGG CAAAAGCGCA GTTTTATCAG AATCTGCAAA ACTACCTGGA AACCGAACTC
AAACGTGATA ATCCGGTACT GATTATGGGC GATATGAATA TCAGCCCTAC AGATCTGGAT
ATCGGCATTG GCGAAGAAAA CCGTAAGCGC TGGCTGCGTA CCGGTAAATG CTCTTTCCTG
CCGGAAGAGC GCGAATGGAT GGACAGGCTG ATGAGCTGGG GGTTGGTCGA TACCTTCCGC
CATGCTAATC CGCAAACAGC AGATCGTTTC TCATGGTTTG ATTACCGCTC AAAAGGTTTT
GACGATAACC GTGGTCTGCG CATCGACCTG CTGCTCGCCA GCCAACCGCT GGCAGAATGT
TGCGTAGAAA CCGGCATCGA CTATGAAATT CGCAGCATGG AAAAACCGTC CGATCACGCC
CCCGTCTGGG CGACCTTCCG CCGCTAA
 
Protein sequence
MKFVSFNING LRARPHQLEA IVEKHQPDVI GLQETKVHDD MFPLEEVAKL GYNVFYHGQK 
GHYGVALLTK ETPIAVRRGF PGDDEEAQRR IIMAEIPSLL GNVTVINGYF PQGESRDHPI
KFPAKAQFYQ NLQNYLETEL KRDNPVLIMG DMNISPTDLD IGIGEENRKR WLRTGKCSFL
PEEREWMDRL MSWGLVDTFR HANPQTADRF SWFDYRSKGF DDNRGLRIDL LLASQPLAEC
CVETGIDYEI RSMEKPSDHA PVWATFRR