Gene SbBS512_E1967 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E1967 
Symbol 
ID6271907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp1797831 
End bp1798589 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content49% 
IMG OID641726021 
Producthypothetical protein 
Protein accessionYP_001880515 
Protein GI187733148 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3137] Putative salt-induced outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCTTT TGAAGACAGT TCCTGCCATC GTTATGTTGG CGGGGGGCAT GTTTGCGTCA 
CTGAATGCAG CTGCCGATGA TTCCGTTTTT ACTGTCATGG ACGATCCTGC CAGCGCTAAA
AAACCTTTCG AAGGTAATCT GAACGCAGGA TATCTTGCAC AATCAGGCAA TACGAAAAGC
TCCTCACTTA CGGCTGACAC CACCATGACC TGGTATGGAC AAACCACTGC CTGGTCGCTG
TGGGGGAACG CCAGTAATAC TTCTTCTAAT GATGAGCGTT CTTCAGAAAA ATATGCGGCG
GGCGGGCGTA GCCGCTTTAA TTTAACTGAT TATGACTATT TATTTGGTCA GGCAAGCTGG
CTGACAGACC GTTATAACGG CTATCGAGAG CGCGATGTGT TGACCGCGGG TTATGGTCGT
CAGTTTTTGA ATGGCCCGGT ACACAGTTTC CGCTTTGAAT TCGGTCCAGG TGTGCGTTAC
GACAAATATA CCGACAATGC CAGTGAAACT CAGCCGCTGG GCTATGCCTC CGGGGCTTAT
GCATGGCAGT TGACTGACAA CGCTAAATTT ACGCAGGGTG TTTCGGTCTT TGGCGCGGAA
GACACAACGC TGAACTCCGA AAGCGCATTA AATGTTGCTA TTAATGAACA TTTTGGACTG
AAGGTGGCTT ACAACGTTAC ATGGAACTCT GAACCTCCAG AGTCTGCACC GGAACATACC
GACCGTCGGA CAACCTTATC GCTGGGCTAC AGCATGTAA
 
Protein sequence
MKLLKTVPAI VMLAGGMFAS LNAAADDSVF TVMDDPASAK KPFEGNLNAG YLAQSGNTKS 
SSLTADTTMT WYGQTTAWSL WGNASNTSSN DERSSEKYAA GGRSRFNLTD YDYLFGQASW
LTDRYNGYRE RDVLTAGYGR QFLNGPVHSF RFEFGPGVRY DKYTDNASET QPLGYASGAY
AWQLTDNAKF TQGVSVFGAE DTTLNSESAL NVAINEHFGL KVAYNVTWNS EPPESAPEHT
DRRTTLSLGY SM