Gene SbBS512_E1961 details

Gene Information

• Locus tag: SbBS512_E1961
• Symbol: thrS
• ID: 6272749
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: -
• Start bp: 1792374
• End bp: 1794302
• Gene Length: 1929 bp
• Protein Length: 642 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 641726015
• Product: threonyl-tRNA synthetase
• Protein accession: YP_001880509
• Protein GI: 187734126
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0441] Threonyl-tRNA synthetase
• TIGRFAM ID: [TIGR00418] threonyl-tRNA synthetase

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.000224309
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCTGTTA TAACTCTTCC TGATGGCAGC CAACGCCATT ACGACCACGC TGTAAGCCCC 
ATGGATGTTG CGCTGGACAT TGGTCCAGGT CTGGCGAAAG CCTGTATCGC AGGGCGCGTT 
AATGGCGAAC TGGTTGATGC TTGCGATCTG ATTGAAAACG ACGCACAACT GTCGATCATT 
ACCGCCAAAG ACGAAGAAGG TCTGGAGATC ATTCGTCACT CCTGTGCGCA CCTGTTAGGG 
CATGCGATTA AACAACTTTG GCCGCATACC AAAATGGCAA TCGGCCCGGT TATTGACAAC 
GGTTTTTATT ACGACGTTGA TCTTGACCGC ACGTTAACCC AGGAAGATGT CGAAGCACTC 
GAGAAGCGGA TGCATGAGCT TGCTGAGAAA AACTACGACG TCATTAAGAA GAAAGTCAGC 
TGGCACGCAG CGCGTGAAAC TTTCGCCAAC CGTGGGGAGA GCTACAAAGT CTCCATTCTT 
GACGAAAACA TCGCCCATGA TGACAAGCCA GGTCTGTACT TCCATGAAGA ATATGTCGAT 
ATGTGCCGCG GTCCGCACGT ACCGAACATG CGTTTCTGCC ATCATTTCAA ACTAATGAAA 
ACGGCAGGGG CTTACTGGCG TGGCGACAGC AACAACAAAA TGTTGCAACG TATTTACGGT 
ACGGCGTGGG CAGACAAAAA AGCACTTAAC GCTTACCTGC AGCGCCTGGA AGAAGCCGCG 
AAACGCGACC ACCGTAAAAT CGGTAAACAG CTCGACCTGT ACCATATGCA GGAAGAAGCG 
CCGGGTATGG TATTCTGGCA CAACGACGGC TGGACCATCT TCCGTGAACT GGAAGTGTTT 
GTTCGTTCTA AACTGAAAGA GTACCAGTAT CAGGAAGTTA AAGGTCCGTT CATGATGGAC 
CGTGTCCTGT GGGAAAAAAC CGGTCACTGG GACAACTACA AAGATGCAAT GTTCACCACA 
TCTTCTGAGA ACCGTGAATA CTGCATTAAG CCGATGAACT GCCCGGGTCA CGTACAAATT 
TTCAACCAGG GGCTGAAGTC TTATCGCGAT CTGCCGCTGC GTATGGCCGA GTTTGGTAGC 
TGCCACCGTA ACGAGCCGTC AGGTTCGCTG CATGGCCTGA TGCGCGTGCG TGGATTTACC 
CAAGATGACG CGCATATCTT CTGTACTGAA GAACAAATTC GCGATGAAGT TAACGGATGT 
ATCCGTTTAG TCTATGATAT GTACAGCACT TTTGGCTTCG AGAAGATCGT CGTCAAACTC 
TCCACTCGTC CTGAAAAACG TATTGGCAGC GACGAAATGT GGGATCGTGC TGAGGCGGAC 
CTGGCGGTTG CGCTGGAAGA AAACAACATC CCGTTTGAAT ATCAACTGGG TGAAGGCGCT 
TTCTACGGTC CGAAAATTGA ATTTACCCTG TATGACTGCC TCGATCGTGC ATGGCAGTGC 
GGTACAGTAC AGCTGGACTT CTCCTTGCCG TCTCGTCTGA GCGCCTCCTA TGTGGGCGAA 
GACAACGAGC GTAAGGTACC GGTAATGATT CACCGCGCAA TTCTGGGGTC GATGGAACGT 
TTCATCGGTA TCCTGACCGA AGAATTCGCT GGTTTCTTCC CGACCTGGCT TGCGCCAGTT 
CAGGTTGTTA TCATGAATAT TACCGATTCA CAGTCTGAAT ACGTTAACGA ATTGACGCAA 
AAACTATCAA ATGCGGGCAT TCGTGTTAAA GCAGACTTGA GAAATGAGAA GATTGGCTTT 
AAAATCCGCG AGCACACTTT GCGTCGCGTC CCATATATGC TGGTCTGTGG TGATAAAGAG 
GTGGAATCAG GCAAAGTTGC CGTTCGCACC CGCCGTGGTA AAGACCTGGG AAGCATGGAC 
GTAAATGAAG TGATCGAGAA GTTGCAACAA GAGATTCGCA GCCGCAGTCT TAAACAATTG 
GAGGAATAA 

 

Protein sequence

MPVITLPDGS QRHYDHAVSP MDVALDIGPG LAKACIAGRV NGELVDACDL IENDAQLSII 
TAKDEEGLEI IRHSCAHLLG HAIKQLWPHT KMAIGPVIDN GFYYDVDLDR TLTQEDVEAL 
EKRMHELAEK NYDVIKKKVS WHAARETFAN RGESYKVSIL DENIAHDDKP GLYFHEEYVD 
MCRGPHVPNM RFCHHFKLMK TAGAYWRGDS NNKMLQRIYG TAWADKKALN AYLQRLEEAA 
KRDHRKIGKQ LDLYHMQEEA PGMVFWHNDG WTIFRELEVF VRSKLKEYQY QEVKGPFMMD 
RVLWEKTGHW DNYKDAMFTT SSENREYCIK PMNCPGHVQI FNQGLKSYRD LPLRMAEFGS 
CHRNEPSGSL HGLMRVRGFT QDDAHIFCTE EQIRDEVNGC IRLVYDMYST FGFEKIVVKL 
STRPEKRIGS DEMWDRAEAD LAVALEENNI PFEYQLGEGA FYGPKIEFTL YDCLDRAWQC 
GTVQLDFSLP SRLSASYVGE DNERKVPVMI HRAILGSMER FIGILTEEFA GFFPTWLAPV 
QVVIMNITDS QSEYVNELTQ KLSNAGIRVK ADLRNEKIGF KIREHTLRRV PYMLVCGDKE 
VESGKVAVRT RRGKDLGSMD VNEVIEKLQQ EIRSRSLKQL EE