| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E1899 |
|---|
| Symbol | |
|---|
| ID | 6268786 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | - |
|---|
| Start bp | 1740026 |
|---|
| End bp | 1740937 |
|---|
| Gene Length | 912 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 641725962 |
|---|
| Product | transcriptional regulator, AraC family |
|---|
| Protein accession | YP_001880456 |
|---|
| Protein GI | 187730148 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATCAAC GCTGTTTTGA TAACGCCAGT GAAACGCTGT TTGTCGCCGG TAAAACGCCA
CGGCTTTCAC GTTTTGCATT TAGCGATGAT CCAAAATGGG AGTCCGGACA TCACGTTCAT
GACAATGAAA CCGAGTTGAT TTACGTCAAG AAAGGGGTTG CAAGGTTTAC CATCGATTCT
TCGTTATATG TCGCACATGC GGATGACATT GTGGTGATAG AACGCGGCAG GCTGCATGCG
GTGGCCTCTG ACGTTAACGA TCCGGCAACG ACGTGTACCT GTGCGCTGTA CGGCTTTCAG
TTTCAGGGGG CTGAGGAAAA TCAGCTACTG CAACCGCATT CTTGTCCGGT AATTGCCGCG
GGGCAGGGAA AAGAAGTCAT AAAAACCTTA TTTAATGAGC TAAGTGTGAT TTTGCCGCAA
AGTAAAAATA GCCAAACATC TTCGTTATGG GATGCATTTG CCTATACGTT AGCCATTCTT
TACTACGAAA ATTTTAAAAA TGCTTATCGT TCGGAGCAGG GGTATATTAA AAAAGATGTT
CTGATAAAAG ATATTCTTTT CTATCTGAAT AATAATTATC GCGAAAAAAT CACTTTAGAA
CAGTTATCGA AAAAATTTCG TGCCAGCGTC AGTTATATTT GCCATGAATT TACCAAAGAG
TATCGTATTT CCCCTATTAA CTATGTTATT CAACGGCGTA TGACGGAAGC AAAATGGTCA
CTCACTAATA CTGAATTATC ACAGGCAGAG ATCTCCTGGC GTGTGGGTTA TGAAAATGTC
GATCACTTTG CCAAACTGTT TTTGCGCCAT GTCGGTTGTT CGCCCAGCGA TTACCGTAGA
CAATTTAAAA ACTGTTTTGC GGAACAAGAA ATCCTATCTG AATTTCCTCA ACCGGTAAGT
CTTGTTGGAT AA
|
|---|
| Protein sequence | MYQRCFDNAS ETLFVAGKTP RLSRFAFSDD PKWESGHHVH DNETELIYVK KGVARFTIDS
SLYVAHADDI VVIERGRLHA VASDVNDPAT TCTCALYGFQ FQGAEENQLL QPHSCPVIAA
GQGKEVIKTL FNELSVILPQ SKNSQTSSLW DAFAYTLAIL YYENFKNAYR SEQGYIKKDV
LIKDILFYLN NNYREKITLE QLSKKFRASV SYICHEFTKE YRISPINYVI QRRMTEAKWS
LTNTELSQAE ISWRVGYENV DHFAKLFLRH VGCSPSDYRR QFKNCFAEQE ILSEFPQPVS
LVG
|
|---|
| |