Gene SbBS512_E1853 details

Gene Information

• Locus tag: SbBS512_E1853
• Symbol: sodB
• ID: 6269987
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: +
• Start bp: 1696563
• End bp: 1697144
• Gene Length: 582 bp
• Protein Length: 193 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 641725918
• Product: superoxide dismutase
• Protein accession: YP_001880416
• Protein GI: 187733707
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG0605] Superoxide dismutase

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.00000511005
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCATTCG AATTACCTGC ACTACCATAT GCTAAAGATG CTCTGGCACC GCACATTTCT 
GCGGAAACTA TCGAGTATCA CTACGGCAAG CATCATCAGA CTTATGTCAC TAACCTGAAC 
AACCTGATTA AAGGTACCGC GTTTGAAGGT AAATCACTGG AAGAGATTAT TCGCAGCTCT 
GAAGGTGGCG TATTCAACAA CGCAGCTCAG GTCTGGAACC ATACTTTCTA CTGGAACTGC 
CTGGCACCGA ACGCCGGTGG CGAACCGACT GGAAAAGTCG CTGAAGCTAT CGCCGCATCT 
TTTGGCAGCT TTGCCGATTT CAAAGCGCAG TTTACTGATG CAGCGATCAA AAACTTTGGT 
TCTGGCTGGA CCTGGCTGGT GAAAAACAGC GATGGCAAAC TGGCTATCGT TTCAACCTCT 
AACGCGGGTA CTCCGCTGAC CACCGATGCG ACTCCGCTGC TGACCGTTGA TGTCTGGGAA 
CACGCTTATT ACATCGACTA TCGCAATGCA CGTCCTGGCT ATCTGGAGCA CTTCTGGGCG 
CTGGTGAACT GGGAATTCGT AGCGAAAAAT CTCGCTGCAT AA 

 

Protein sequence

MSFELPALPY AKDALAPHIS AETIEYHYGK HHQTYVTNLN NLIKGTAFEG KSLEEIIRSS 
EGGVFNNAAQ VWNHTFYWNC LAPNAGGEPT GKVAEAIAAS FGSFADFKAQ FTDAAIKNFG 
SGWTWLVKNS DGKLAIVSTS NAGTPLTTDA TPLLTVDVWE HAYYIDYRNA RPGYLEHFWA 
LVNWEFVAKN LAA