| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E1809 |
|---|
| Symbol | malX |
|---|
| ID | 6271497 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | + |
|---|
| Start bp | 1655984 |
|---|
| End bp | 1657576 |
|---|
| Gene Length | 1593 bp |
|---|
| Protein Length | 530 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641725877 |
|---|
| Product | bifunctional PTS system maltose and glucose-specific transporter subunits IICB |
|---|
| Protein accession | YP_001880375 |
|---|
| Protein GI | 187733435 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific
[COG1264] Phosphotransferase system IIB components |
|---|
| TIGRFAM ID | [TIGR00826] PTS system, glucose-like IIB component
[TIGR00852] PTS system, maltose and glucose-specific subfamily, IIC component
[TIGR02004] PTS system, maltose and glucose-specific IIBC component |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGGCGA AAACAGCACC GAAAGTCACG CTGTGGGAGT TCTTCCAGCA GTTAGGCAAA
ACCTTCATGT TACCCGTGGC ATTATTGTCG TTCTGCGGCA TTATGCTCGG CATTGGTAGT
TCTCTTAGCA GCCATGATGT CATAACCCTG ATCCCGGTCC TGGGCAACCC CGTGTTGCAG
GCTATCTTTA CCTGGATGAG TAAGATTGGC TCGTTTGCTT TTAGTTTCCT GCCTGTCATG
TTCTGTATCG CCATCCCGCT GGGCCTGGCA CGCGAAAATA AAGGCGTAGC GGCATTCGCT
GGCTTCGTCG GTTATGCGGT AATGAACCTC GCGGTAAACT TCTGGTTGAC CAATAAAGGC
ATTCTGCCAA CCACGGATGC CGCGGTTCTG AAAGCCAATA ACATCCAGAG CATTCTTGGG
ATCCAGTCGA TCGATACCGG GATCCTCGGT GCGGTGATCG CCGGTATTAT CGTCTGGATG
CTGCATGAGC GTTTCCATAA TATCCGCCTG CCGGATGCGC TGGCATTCTT CGGCGGTACG
CGCTTCGTAC CAATTATCTC CTCGCTGGTG ATGGGCCTTG TCGGCCTGGT GATTCCATTA
GTCTGGCCGA TTTTCGCCAT GGGTATTAGC GGCTTGGGCC ATATGATAAA CAGCGCGGGT
GATTTCGGAC CGATGCTGTT TGGTACCGGT GAACGTCTGC TGTTGCCGTT TGGTCTGCAT
CACATTCTGG TGGCATTAAT TCGCTTTACC GACGCAGGCG GCACGCAGGA AGTCTGCGGT
CAAACCGTCA GCGGCGCACT GACCATCTTC CAAGCGCAAT TGAGTTGCCC GACCACTCAC
GGTTTTTCTG AAAGCGCCAC GCGTTTCCTT TCGCAAGGTA AAATGCCTGC GTTTCTCGGC
GGTCTGCCAG CTGCAGCGTT AGCTATGTAT CACTGCGCGC GCCCGGAAAA TCGCCATAAA
ATTAAAGGTC TGCTGATTTC TGGCCTGATC GCCTGCGTCG TTGGCGGCAC TACCGAACCG
CTGGAATTCC TGTTCCTGTT CGTAGCGCCA GTTCTGTATG TCATCCACGC GCTGTTAACC
GGCCTCGGCT TCACCGTCAT GTCTGTGCTC GGCGTCACCA TCGGTAATAC CGACGGCAAT
ATCATCGACT TCGTGGTGTT CGGTATTTTG CATGGTCTGT CAACCAAGTG GTACATGGTG
CCAGTGGTGG CGGCAATCTG GTTTGTCGTT TACTACGCCA TCTTCCGTTT CGCTATCACC
CGCTTCAATC TCAAAACCCC GGGGCGCGAT AGCGAAGTTG CCAGCTCAAT CGAAAAAGCC
GTTGCCGCTG CGCCGGGTAA ATCAGGTTAC AACGTTCCTG CAATCCTCGA AGCATTAGGC
GGTGCCGACA ATATTGTCAG CCTCGATAAC TGCATTACCC GTCTGCGTTT GTCTGTGAAA
GATATGTCGC TTGTTAATGT GCAGGCACTG AAGGACAATC GGGCAATTGG CGTAGTACAA
CTTAATCAAC ATAACCTGCA GGTTGTTATC GGGCCACAAG TTCAGTCAGT AAAAGATGAA
ATGGCCGGTC TGATGCATAC TGTCCAGGCA TAA
|
|---|
| Protein sequence | MTAKTAPKVT LWEFFQQLGK TFMLPVALLS FCGIMLGIGS SLSSHDVITL IPVLGNPVLQ
AIFTWMSKIG SFAFSFLPVM FCIAIPLGLA RENKGVAAFA GFVGYAVMNL AVNFWLTNKG
ILPTTDAAVL KANNIQSILG IQSIDTGILG AVIAGIIVWM LHERFHNIRL PDALAFFGGT
RFVPIISSLV MGLVGLVIPL VWPIFAMGIS GLGHMINSAG DFGPMLFGTG ERLLLPFGLH
HILVALIRFT DAGGTQEVCG QTVSGALTIF QAQLSCPTTH GFSESATRFL SQGKMPAFLG
GLPAAALAMY HCARPENRHK IKGLLISGLI ACVVGGTTEP LEFLFLFVAP VLYVIHALLT
GLGFTVMSVL GVTIGNTDGN IIDFVVFGIL HGLSTKWYMV PVVAAIWFVV YYAIFRFAIT
RFNLKTPGRD SEVASSIEKA VAAAPGKSGY NVPAILEALG GADNIVSLDN CITRLRLSVK
DMSLVNVQAL KDNRAIGVVQ LNQHNLQVVI GPQVQSVKDE MAGLMHTVQA
|
|---|
| |