Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E1754 |
Symbol | |
ID | 6269690 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 1591687 |
End bp | 1593006 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641725828 |
Product | putative lipoprotein |
Protein accession | YP_001880326 |
Protein GI | 187733594 |
COG category | [S] Function unknown |
COG ID | [COG1649] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.63355 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGATATCT GCTCCCGAAA CAAGAAATTA ACGATTAGAA GACCAGCGAT ACTGGTTGCA CTGGCACTTT TACTGTGTAG TTGTAAAAGC ACGCCTCCAG AGTCCATGGT GACACCACCA GCAGGTTCAA AGCCACCAGC CACGACGCAA CAATCGTCAC AACCGATGCG TGGCATCTGG CTGGCCACGG TGTCTCGCCT CGACTGGCCA CCGGTTTCCT CGGTTAACAT TAGTAACCCC ACCAGCCGGG CCCGTGTACA ACAACAGGCG ATGATCGACA AACTGGATCA TCTGCAACGT CTCGGTATAA ACACGGTCTT TTTCCAGGTC AAGCCGGACG GTACCGCCCT GTGGCCATCG AAAATTTTGC CGTGGTCCGA TCTTATGACC GGTAAGATTG GTGAAAATCC GGGTTACGAT CCGCTGCAAT TTATGCTCGA CGAAGCCCAC AAGCGTGGGA TGAAAGTACA CGCCTGGTTT AACCCCTATC GCGTATCGGT TAATACGAAG CCCGGTACTA TCAGGGAACT GAATAGCACT CTGTCTCAAC AACCGGCGAG CGTCTATGTG CAACACCGTG ACTGGATCAG AACGTCTGGC GATCGCTTTG TCCTCGACCC GGGCATCCCT GAGGTTCAGG ACTGGATCAC ATCAATAGTC GCCGAAGTGG TTTCCCGCTA TCCGGTAGAT GGCGTGCAGT TTGACGACTA TTTCTATACG GAGTCACCGG GTTCACGGCT AAATGATAAC GAAACGTACC GTAAATACGG AGGCGCATTT GCGTCAAAAG CAGACTGGCG GCGCAACAAT ACTCAGCAGT TAATTACAAA AGTATCGCAC ACCATTAAAA GCATTAAGCC GGGAGTCGAA TTTGGCGTTA GCCCGGCAGG CGTGTGGCGT AACCGATCAC ACGATCCGCT CGGTTCCGAT ACCCGAGGCG CGGCAGCCTA TGACGAATCC TACGCTGACA CCCGTCGATG GGTGGAACAA GGATTGCTGG ATTACATTGC TCCCCAAATT TACTGGCCGT TCTCACGGAG TGCCGCGCGT TATGACGTGT TGGCAAAATG GTGGGCGGAT GTCGTTAAAC CGACCAGGAC CCGCCTGTAT ATCGGTATCG CCTTCTATAA AGTGGGTGAA CCTTCAAAGA TAGAGCCAGA CTGGATGATT AACGGCGGCG TACCGGAACT GAAAAAGCAG CTCGATCTTA ACGATGCGGT ACCAGAAATT AGCGGCACCA TCTTGTTCCG TGAGGACTAT CTGAATAAAC CGCAGACTCA ACAAGCGGTC AGCTATCTGC AAAGTCGTTG GGGCAGTTAA
|
Protein sequence | MDICSRNKKL TIRRPAILVA LALLLCSCKS TPPESMVTPP AGSKPPATTQ QSSQPMRGIW LATVSRLDWP PVSSVNISNP TSRARVQQQA MIDKLDHLQR LGINTVFFQV KPDGTALWPS KILPWSDLMT GKIGENPGYD PLQFMLDEAH KRGMKVHAWF NPYRVSVNTK PGTIRELNST LSQQPASVYV QHRDWIRTSG DRFVLDPGIP EVQDWITSIV AEVVSRYPVD GVQFDDYFYT ESPGSRLNDN ETYRKYGGAF ASKADWRRNN TQQLITKVSH TIKSIKPGVE FGVSPAGVWR NRSHDPLGSD TRGAAAYDES YADTRRWVEQ GLLDYIAPQI YWPFSRSAAR YDVLAKWWAD VVKPTRTRLY IGIAFYKVGE PSKIEPDWMI NGGVPELKKQ LDLNDAVPEI SGTILFREDY LNKPQTQQAV SYLQSRWGS
|
| |