| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E1723 |
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| Symbol | |
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| ID | 6269292 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 1561929 |
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| End bp | 1564031 |
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| Gene Length | 2103 bp |
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| Protein Length | 700 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641725802 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001880300 |
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| Protein GI | 187732814 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATTT TTTCCGTCCG ACAGACCGTT TTGCCCGCAC TGCTTGTCCT TTCCCCCGTT
GTTTTTGCCG CTGATGAACA GACTATGATT GTCAGTGCCG CACCGCAGGT GGTTTCAGAA
CTGGATACCC CAGCAGCAGT AAGCGTGGTG GATGGCGAGG AGATGCGCCT GGCAACACCG
CGCATTAACT TGTCCGAATC ACTGACCGGC GTGCCTGGTT TGCAGGTACA AAACCGGCAG
AACTATGCGC AAGATTTACA GCTGTCGATT CGCGGATTTG GCTCCCGCTC CACTTACGGT
ATTCGCGGTA TTCGCCTGTA TGTGGACGGT ATTCCCGCCA CCATGCCCGA CGGGCAAGGG
CAAACATCCA ACATCAATTT AAGCAGTGTG CAAAATGTGG AAGTGCTGCG TGGCCCCTTC
TCTGCCCTGT ATGGCAACGC GTCTGGTGGG GTAATGAATG TCACCACCCA GACCGGACAA
CAGCCACCAA CCATTGAAGC CAGTAGTTAC TACGGCAGTT TTGGCAGCTG GCGCTATGGG
CTGAAAGCAA CGGGCGCAAC GGGAGACGGC ACACAGCCTG GCGATGTCGA TTACACCGTC
TCAACCACGC GTTTTACGAC CCACGGCTAT CGTGACCATA GTGGCGCACA GAAAAATTTA
GCCAATGCCA AACTGGGCGT ACGCATTGAT GAAGCCAGCA AATTAAGTCT GATTTTCAAT
AGTGTGGATA TCAAAGCAGA TGACCCAGGT GGGCTAACCA AAGCAGAATG GAAGGCTAAT
CCACAACAAG CGCCTCGTGC AGAACAGTAC GACACGCGAA AAACCATCAA GCAAACTCAG
GCTGGGTTGC GCTATGAGCG TAGCCTGAGC GCGCAAGATG ATATGAGTGT GATGATGTAT
GCCGGAGAGC GAGAAACGAC CCAGTACCAG TCAATACCCA TGGCACCACA ACTTAACCCG
TCACATGCGG GCGGCGTGAT TACCCTGCAA CGCCATTACC AGGGGATAGA CAGCCGCTGG
ACACACCGTG GTGAACTGGG CGTTCCGGTC ACGTTCACTA CCGGCCTGAA CTACGAAAAC
ATGAGTGAAA ACCGCAAGGG CTACAATAAC TTCCGCCTGA ATAGCGGCAT GCCGGAGTAC
GGGCAAAAAG GTGAGTTGCG TCGCGACGAA CGCAATCTGA TGTGGAACAT CGATCCCTAT
TTACAGACGC AGTGGCAGCT GAGCGAAAAA CTGTCGCTGG ATGCTGGCGT GCGCTACAGC
TCCGTGTGGT TTGATTCCAA CGACCATTAC GTTACTCCGG GTAACGGCGA TGACAGCGGT
GATGCCAGTT ATCATAAATG GCTACCTGCC GGTTCGTTAA AATATGCAAT GACCGATGCC
TGGAATATCT ATCTGGCAGC CGGGCGAGGT TTTGAAACGC CGACGATTAA TGAGCTGTCT
TATCGTGCTG ATGGGCAAAG CGGTATGAAC TTTGGTTTAA AACCATCCAC CAACGATACA
ATTGAGATCG GCAGTAAAAC GCGTATTGGT GATGGGCTGC TTAGTCTCGC ATTGTTTCAG
ACCGACACTG ATGATGAAAT TGTTGTCGAT AGCAGTAGCG GTGGGCGTAC GACTTACAAA
AATGCCGGAA AGACCCGTCG TCAAGGCGCT GAACTGGCAT GGGATCAACG TTTCGCAGGA
GATTTTCGCG TAAACGCGTC CTGGGCCTGG CTTGATGCGA CCTATCGCAG CAATGTTTGC
AATGAACAGG ATTGTAACGG TAATCGGATG CCAGGGATCG CCCGTAATAT GGGCTTTGCG
TCGATAGGTT ATGTACCGGA AGATGGTTGG TATGCAGGCA CGGAAGCGCG TTATATGGGC
GATATTATGG CAGATGATGA AAATACGGCA AAAGCGCCGT CTTATACTCT CGTCGGCTTA
TTCACCGGGT ATAAATACAA TTACCATAAT TTAACTGTGG ATTTATTTGG TCGTGTCGAT
AATTTATTCG ATAAAGAATA CGTTGGTTCT GTCATTGTCA ATGAGTCAAA CGGGCGATAT
TACGAACCTT CGCCCGGACG AAATTATGGT GTCGGCATGA ATATTGCGTG GAGATTTGAG
TAA
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| Protein sequence | MKIFSVRQTV LPALLVLSPV VFAADEQTMI VSAAPQVVSE LDTPAAVSVV DGEEMRLATP
RINLSESLTG VPGLQVQNRQ NYAQDLQLSI RGFGSRSTYG IRGIRLYVDG IPATMPDGQG
QTSNINLSSV QNVEVLRGPF SALYGNASGG VMNVTTQTGQ QPPTIEASSY YGSFGSWRYG
LKATGATGDG TQPGDVDYTV STTRFTTHGY RDHSGAQKNL ANAKLGVRID EASKLSLIFN
SVDIKADDPG GLTKAEWKAN PQQAPRAEQY DTRKTIKQTQ AGLRYERSLS AQDDMSVMMY
AGERETTQYQ SIPMAPQLNP SHAGGVITLQ RHYQGIDSRW THRGELGVPV TFTTGLNYEN
MSENRKGYNN FRLNSGMPEY GQKGELRRDE RNLMWNIDPY LQTQWQLSEK LSLDAGVRYS
SVWFDSNDHY VTPGNGDDSG DASYHKWLPA GSLKYAMTDA WNIYLAAGRG FETPTINELS
YRADGQSGMN FGLKPSTNDT IEIGSKTRIG DGLLSLALFQ TDTDDEIVVD SSSGGRTTYK
NAGKTRRQGA ELAWDQRFAG DFRVNASWAW LDATYRSNVC NEQDCNGNRM PGIARNMGFA
SIGYVPEDGW YAGTEARYMG DIMADDENTA KAPSYTLVGL FTGYKYNYHN LTVDLFGRVD
NLFDKEYVGS VIVNESNGRY YEPSPGRNYG VGMNIAWRFE
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