| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E1612 |
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| Symbol | sitA_2 |
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| ID | 6273239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 1466164 |
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| End bp | 1467048 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641725702 |
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| Product | iron/manganese transport system periplasmic binding protein SitA |
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| Protein accession | YP_001880202 |
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| Protein GI | 187733326 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.0432091 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGGGTGCC TCGCCCTCAC CTGCTCGATC GCATTTCAGG CAAGTGCAAC TGAAAAATTC
AAGGTCATTA CAACATTTAC CATCATCGCG GATATGGCCA AAAACGTGGC TGGAGATGCT
GCAGAAGTCT CATCCATAAC CAAGCCTGGT GCAGAAATTC ATGAGTATCA GCCTACCCCT
GGCGATATTA AACGTGCACA GGGGGCACAA CTGATTCTCG CCAATGGTAT GAATCTGGAA
TTGTGGTTCC AACGCTTTTA CCAGCATCTC AATGGGGTTC CAGAAGTAAT TGTCTCTTCG
GGTGTGACGC CAGTAGGGAT CACCGAAGGA CCCTATGAGG GCAAACCTAA TCCCCATGCA
TGGATGTCGC CAGATAATGC TCTGATTTAC GTCGATAATA TTCGTGATGC GTTGATAAAA
TACGATCCGG CAAATGCACA AACCTACCAA CGTAATGCCG ATACTTATAA AGCCAAGATT
ACCCAAACCC TTGCCCCCCT GCGTAAGCAG ATTACGGAAC TCCCTGAGAA TCAGCGATGG
ATGGTCACCA GTGAAGGGGC TTTTTCTTAT CTCGCACGCG ATTTGGGGCT AAAAGAGCTT
TATCTGTGGC CGATTAATGC CGATCAACAA GGAACACCGC AGCAGGTACG TAAGGTTGTT
GATATAGTTA AGAAAAATCA TATCCCGGCA GTCTTTAGCG AGAGTACGAT TTCCGATAAA
CCAGCGCGTC AGGTTGCGCG TGAAACCGGC GCACACTACG GCGGTGTGCT CTATGTCGAT
TCCCTGAGCA CAGAAAACGG CCCGGTACCT ACGTATATCG ACCTTCTTAA GGTTACTACC
AGTACGCTGG TACAGGGAAT TAAAGCCGGG AAAAGGGAGA AATAA
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| Protein sequence | MGCLALTCSI AFQASATEKF KVITTFTIIA DMAKNVAGDA AEVSSITKPG AEIHEYQPTP
GDIKRAQGAQ LILANGMNLE LWFQRFYQHL NGVPEVIVSS GVTPVGITEG PYEGKPNPHA
WMSPDNALIY VDNIRDALIK YDPANAQTYQ RNADTYKAKI TQTLAPLRKQ ITELPENQRW
MVTSEGAFSY LARDLGLKEL YLWPINADQQ GTPQQVRKVV DIVKKNHIPA VFSESTISDK
PARQVARETG AHYGGVLYVD SLSTENGPVP TYIDLLKVTT STLVQGIKAG KREK
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