Gene SbBS512_E1575 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E1575 
Symbolfnr 
ID6270689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp1434926 
End bp1435678 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content51% 
IMG OID641725665 
Productfumarate/nitrate reduction transcriptional regulator 
Protein accessionYP_001880171 
Protein GI187732982 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCCCGG AAAAGCGAAT TATACGGCGC ATTCAGTCTG GCGGTTGTGC TATCCATTGC 
CAGGATTGCA GCATCAGCCA GCTTTGCATC CCGTTCACAC TCAACGAACA TGAGCTTGAT
CAGCTTGATA ATATCATTGA GCGGAAGAAG CCTATTCAGA AAGGCCAGAC GCTGTTTAAG
GCTGGTGATG AACTTAAATC GCTTTATGCC ATCCGCTCCG GTACGATTAA AAGTTATACC
ATCACTGAGC AAGGCGACGA GCAAATCACT GGTTTCCATT TAGCTGGCGA CCTGGTGGGA
TTTGACGCCA TCGGCAGCGG CCATCACCCG AGCTTCGCTC AGGCGCTGGA AACCTCGATG
GTATGTGAAA TCCCGTTCGA AACGCTGGAC GATTTGTCCG GTAAAATGCC GAATCTGCGT
CAGCAGATGA TGCGTCTGAT GAGCGGTGAA ATCAAAGGCG ATCAGGACAT GATCCTGCTG
TTGTCGAAGA AAAATGCCGA GGAACGTCTG GCTGCATTCA TCTACAACCT GTCCCGTCGT
TTTGCCCAAC GCGGCTTCTC CCCTCGTGAA TTCCGCCTGA CGATGACTCG TGGCGATATC
GGTAACTATC TGGGCCTGAC GGTAGAAACC ATCAGCCGTC TGCTAGGTCG CTTCCAGAAA
AGCGGTATGC TGGCAGTCAA AGGTAAATAC ATCACCATCG AAAATAACGA TGCGCTGGCC
CAGCTTGCTG GTCATACGCG TAATGTTGCC TGA
 
Protein sequence
MIPEKRIIRR IQSGGCAIHC QDCSISQLCI PFTLNEHELD QLDNIIERKK PIQKGQTLFK 
AGDELKSLYA IRSGTIKSYT ITEQGDEQIT GFHLAGDLVG FDAIGSGHHP SFAQALETSM
VCEIPFETLD DLSGKMPNLR QQMMRLMSGE IKGDQDMILL LSKKNAEERL AAFIYNLSRR
FAQRGFSPRE FRLTMTRGDI GNYLGLTVET ISRLLGRFQK SGMLAVKGKY ITIENNDALA
QLAGHTRNVA