Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E1558 |
Symbol | |
ID | 6268667 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 1422386 |
End bp | 1423174 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641725653 |
Product | murein peptide amidase A |
Protein accession | YP_001880159 |
Protein GI | 187732079 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2866] Predicted carboxypeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGATAATCC GCAAAATTTG CACAACACTG CCTGTAATAC TTCCTGAACC AGAGACGATC ATGACCGTAA CCCGCCCACG CGCCGAACGC GGCGCATTTC CGCCCGGAAC AGAACATTAC GGACGTTCAT TATTGGGCGC GCCGTTAATC TGGTTTCCTG CCCCTGCAGC CAGCCGCGAA AGTGGTTTGA TTCTGGCTGG CACTCACGGT GATGAAAACT CTTCGGTCGT CACGCTCTCC TGTGCTCTGC GGACGTTGAC ACCTTCTTTG CGCCGCCATC ATGTGGTGCT GTGTGTGAAT CCTGACGGCT GCCAGCTGGG GTTACGGGCC AATGCTAATG GTGTGGATTT AAACAGAAAC TTTCCGGCGG CGAACTGGAA GGAAGGTGAA ACGGTTTATC GCTGGAACAG CGCCGCTGAA GAACGTGATG TCGTATTACT GACAGGTGAC AAACCTGGCT CAGAACCTGA AACCCAGGCG CTGTGCCAGC TTATACACCG CATTCAACCT GCCTGGGTGG TCTCATTCCA CGATCCACTG GCCTGTATTG AAGATCCCAG ACACAGCGAA TTAGGCGAAT GGCTGGCCCA GGCGTTTGAA TTGCCTCTGG TAACCAGCGT CGGTTATGAA ACGCCTGGCT CTTTCGGCAG TTGGTGTGCA GATCTCAACT TGCATTGCAT CACCGCAGAG TTTCCGCCCA TCTCCTCCGA CGAAGCCAGC GAAAAATATC TCTTTGCGAT GGCATACTTG CTGCGCTGGC ATCCTAAAGA TGCAATTCGC CCGTCGTGA
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Protein sequence | MIIRKICTTL PVILPEPETI MTVTRPRAER GAFPPGTEHY GRSLLGAPLI WFPAPAASRE SGLILAGTHG DENSSVVTLS CALRTLTPSL RRHHVVLCVN PDGCQLGLRA NANGVDLNRN FPAANWKEGE TVYRWNSAAE ERDVVLLTGD KPGSEPETQA LCQLIHRIQP AWVVSFHDPL ACIEDPRHSE LGEWLAQAFE LPLVTSVGYE TPGSFGSWCA DLNLHCITAE FPPISSDEAS EKYLFAMAYL LRWHPKDAIR PS
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