Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E1532 |
Symbol | |
ID | 6271856 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 1399255 |
End bp | 1400640 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641725630 |
Product | amino acid permease |
Protein accession | YP_001880136 |
Protein GI | 187731252 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCTATTA ATTCACCACT GAATATTGCT GCGCAACCCG GCAAAACCCG TCTGCGAAAA TCACTGAAAT TGTGGCAGGT GGTGATGATG GGTCTGGCCT ATCTCACGCC GATGACCGTA TTTGATACTT TTGGTATTGT CTCCGGCATT AGCGACGGTC ACGTTCCGGC GTCCTATTTG CTGGCGCTGG CGGGCGTGCT GTTTACCGCT ATCAGCTACG GCAAACTGGT TCGCCAGTTT CCGGAGGCCG ATTCGGCCTA TACCTACGCG CAAAAGTCGA TTAACCCGCA CGTCGGATTT ATGGTCGGCT GGTCATCGCT GCTGGATTAT CTCTTTTTGC CGATGATCAA CGTCTTGTTG GCGAAAATCT ATCTCTCCGC CCTCTTCCCG GAAGTGCCGC CGTGGGTGTG CGTAGTAACC TTCGTCGCCA TTTTAACCGC CGCGAATCTG AAGAGCATCA ACCTAGTCGC TAACTTCAAT ACCCTGTTTG TACTGGTGCA AATCTCCATC ATGGTGGTGT TTATCTTCCT GGTAGTTCAG GGACTGCATA AAGGAGAAGG CGTTGGCACC GTCTGGTCAC TTCAGCCGTT TATCAGCGAG AACGCGCACC TGATCCCGAT TATTACCGGG GCGACGATTG TCTGTTTCTC CTTCCTCGGT TTCGATGCGG TGACCACGCT TTCGGAAGAG ACGCCGGACG CCGCACGCGT GATCCCGAAA GCCATCTTCC TGACGGCGGT CTACGGTGGC GTTATCTTTA TCGCGGCGTC GTTCTTTATG CAGCTGTTCT TTCCCGATAT CAGCCGCTTT AAAGATCCGG ATGCCGCACT GCCTGAAATT GCGCTGTACG TCGGCGGCAA GCTCTTCCAG TCGATTTTCC TCTGCACCAC GTTTGTGAAC ACGTTAGCCT CTGGCCTGGC TTCACATGCC AGCGTGTCGC GTCTGCTGTA TGTGATGGGG CGTGACAATG TGTTTCCGGA GCGCGTGTTT GGCTATGTGC ACCCAAAATG GCGGACTCCG GCACTCAACG TCATTATGGT CGGGATTGTC GCGTTGTCGG CGCTGTTCTT CGATTTAGTT ACCGCCACAG CGTTAATTAA CTTCGGTGCT CTGGTGGCGT TTACCTTCGT GAATCTGTCG GTGTTTAATC ATTTCTGGCG GCGTAAAGGA ATGAATAAAA GCTGGAAGGA TCACTTCCAC TATTTGCTGA TGCCGCTGGT TGGCGCGCTG ACGGTGGGTG TGCTGTGGGT TAACCTCGAG TCAACGTCAC TGACACTCGG TCTGGTATGG GCTTCGTTAG GCGGCGCATA TTTATGGTAT CTGATCCGCC GCTATCGCAA AGTGCCGTTG TATGATGGTG ACAGAACGCC GGTGAGTGAA ACGTAA
|
Protein sequence | MAINSPLNIA AQPGKTRLRK SLKLWQVVMM GLAYLTPMTV FDTFGIVSGI SDGHVPASYL LALAGVLFTA ISYGKLVRQF PEADSAYTYA QKSINPHVGF MVGWSSLLDY LFLPMINVLL AKIYLSALFP EVPPWVCVVT FVAILTAANL KSINLVANFN TLFVLVQISI MVVFIFLVVQ GLHKGEGVGT VWSLQPFISE NAHLIPIITG ATIVCFSFLG FDAVTTLSEE TPDAARVIPK AIFLTAVYGG VIFIAASFFM QLFFPDISRF KDPDAALPEI ALYVGGKLFQ SIFLCTTFVN TLASGLASHA SVSRLLYVMG RDNVFPERVF GYVHPKWRTP ALNVIMVGIV ALSALFFDLV TATALINFGA LVAFTFVNLS VFNHFWRRKG MNKSWKDHFH YLLMPLVGAL TVGVLWVNLE STSLTLGLVW ASLGGAYLWY LIRRYRKVPL YDGDRTPVSE T
|
| |