Gene SbBS512_E1385 details

Gene Information

• Locus tag: SbBS512_E1385
• ID: 6271655
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: +
• Start bp: 1262028
• End bp: 1262744
• Gene Length: 717 bp
• Protein Length: 238 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 641725491
• Product: chaC protein
• Protein accession: YP_001880001
• Protein GI: 187730621
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG3703] Uncharacterized protein involved in cation transport

Plasmid Coverage information

• Num covering plasmid clones: 38
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGTGGC GGAGGTGTAA GGTGATAACG CGTGATTTCT TGATGAATGC CGATTGTAAA 
ACGGCATTTG GTGCCATTGA AGAATCACTC TTATGGTCAG CAGAGCAACG AGCGGCTTCG 
CTGGCGGCGA CGCTGGCTTG TCGACCTGAT GAGGGACCGG TGTGGATCTT CGGTTATGGA 
TCGTTGATGT GGAATCCGGC ACTGGAGTTT ACCGAGTCGT GCACCGGTAC ACTGGTTGGA 
TGGCATCGCG CGTTTTGCCT GCGCCTGACC GCCGGGCGCG GGACTGCGCA CCAGCCGGGA 
CGGATGCTTG CACTGAAAGA GGGCGGACGC ACTACAGGCG TCGCCTATCG ACTGCCAGAA 
GAGACGCTGG AGCAGGAACT AACCCTGTTG TGGAAGCGCG AGATGATTAC CGGCTGTTAT 
CTGCCAACCT GGTGTCAGCT TGATCTTGAT GATGGATGCA CAGTAAACGC CATTGTGTTT 
ATTATGGACC CGCGACATCC AGAATATGAA TCTGACACTC GCGCTCAGGT CATCGCGCCG 
TTGATTGCGG CGGCGAGCGG TCCGCTGGGA ACCAACGCAC AATACCTGTT TTCACTGGAA 
CAGGAGCTTA TCAAACTGGG AATGCAGGAC GATGGGCTGA ATGATTTGCT GGTATCGGTA 
AAAAAACTGC TGGCGGAGAA TTATCCGGAT GGTGTGTTAC GGCCGGGATT CGCCTGA 

 

Protein sequence

MQWRRCKVIT RDFLMNADCK TAFGAIEESL LWSAEQRAAS LAATLACRPD EGPVWIFGYG 
SLMWNPALEF TESCTGTLVG WHRAFCLRLT AGRGTAHQPG RMLALKEGGR TTGVAYRLPE 
ETLEQELTLL WKREMITGCY LPTWCQLDLD DGCTVNAIVF IMDPRHPEYE SDTRAQVIAP 
LIAAASGPLG TNAQYLFSLE QELIKLGMQD DGLNDLLVSV KKLLAENYPD GVLRPGFA