Gene SbBS512_E1378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E1378 
SymbolsirB1 
ID6268747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp1256860 
End bp1257669 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content47% 
IMG OID641725487 
Productputative transcriptional regulator 
Protein accessionYP_001879997 
Protein GI187731143 
COG category[S] Function unknown 
COG ID[COG2912] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.0629002 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGATCGT TAGCTGATTT CGAATTTAAT AAAGCGCCAT TGTGCGAAGG CATGATCCTG 
GCTTGCGAAG CAATCCGCCG CGATTTTCCC TCGCAAGATG TTTACGACGA ACTGGAGCGT
CTCGTTAGTC TGGCGAAGGA AGAAATCAGC CAGCTTCTGC CTTTAGAAGA GCAGCTGGAA
AAACTGATCG CGCTGTTTTA CGGCGACTGG GGATTTAAAG CCTCACGCGG CGTTTATCGT
CTTTCCGATG CATTATGGCT GGACCAGGTG TTAAAGAATC GACAGGGCAG TGCGGTATCA
TTAGGTGCGG TTTTATTATG GGTCGCGAAT CGTCTCGATT TGCCGCTGCT GCCGGTGATT
TTCCCTACGC AGCTGATATT GCGCATTGAA TGTCCGGATG GCGAAATTTG GCTGATTAAT
CCTTTTAACG GTGAATCGTT AAGCGAACAT ATGCTGGACG TATGGTTAAA GGGAAATATC
AGCCCGTCGG CGGAACTGTT TTATGAAGAC CTTGATGAAG CTGATAACAT TGAGGTAATC
CGCAAATTGC TGGATACACT CAAAGCCTCG TTGATGGAAG AAAATCAGAT GGAGCTGGCG
TTACGCACCA GCGAAGCTTT ATTACAATTC AACCCTGAAG ATCCCTATGA AATTCGCGAT
CGCGGGTTGA TTTATGCGCA ACTGGATTGC GAACACGTTG CGTTGAACGA TTTAAGTTAT
TTCGTTGAAC AGTGTCCGGA AGACCCGATC AGCGAAATGA TCCGTGCGCA AATAAATAAC
ATCGCGCATA AACATATTGT GCTGCATTAA
 
Protein sequence
MRSLADFEFN KAPLCEGMIL ACEAIRRDFP SQDVYDELER LVSLAKEEIS QLLPLEEQLE 
KLIALFYGDW GFKASRGVYR LSDALWLDQV LKNRQGSAVS LGAVLLWVAN RLDLPLLPVI
FPTQLILRIE CPDGEIWLIN PFNGESLSEH MLDVWLKGNI SPSAELFYED LDEADNIEVI
RKLLDTLKAS LMEENQMELA LRTSEALLQF NPEDPYEIRD RGLIYAQLDC EHVALNDLSY
FVEQCPEDPI SEMIRAQINN IAHKHIVLH