Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E1248 |
Symbol | |
ID | 6271606 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 1146568 |
End bp | 1146897 |
Gene Length | 330 bp |
Protein Length | 109 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641725373 |
Product | helix-turn-helix domain protein |
Protein accession | YP_001879887 |
Protein GI | 187730851 |
COG category | [K] Transcription |
COG ID | [COG1476] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.000139831 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTTTAC AGAACAAAAA TTCTGCAATC AACAACCGTC TTCGCACCCA ACGCGAAGCC TGCGGCTTAA CAACCGCCGA ACTCGCCAGG CTGCTCGATC TCGATGAAGA AATTATCATC CAGTGGGAGA GCGGAGAGTA TGAACCAACT ATCAGTATGC TTATCCCACT GGCAAATATT CTTGGCTGCG ATCCGATGTG GCTGTTAACT GGTGAGGTTA CTCCTCCGGA GCAACCAAAA AGTGAGGAGC AGCAACACCA TGACGCATCT CAACAAGTTT GCCCCTTATC TCGCGAAGCT CTTCTGCGGA AGAACCAATA CCAATGGTGA
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Protein sequence | MLLQNKNSAI NNRLRTQREA CGLTTAELAR LLDLDEEIII QWESGEYEPT ISMLIPLANI LGCDPMWLLT GEVTPPEQPK SEEQQHHDAS QQVCPLSREA LLRKNQYQW
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