Gene SbBS512_E1248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E1248 
Symbol 
ID6271606 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp1146568 
End bp1146897 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content49% 
IMG OID641725373 
Producthelix-turn-helix domain protein 
Protein accessionYP_001879887 
Protein GI187730851 
COG category[K] Transcription 
COG ID[COG1476] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.000139831 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTTTAC AGAACAAAAA TTCTGCAATC AACAACCGTC TTCGCACCCA ACGCGAAGCC 
TGCGGCTTAA CAACCGCCGA ACTCGCCAGG CTGCTCGATC TCGATGAAGA AATTATCATC
CAGTGGGAGA GCGGAGAGTA TGAACCAACT ATCAGTATGC TTATCCCACT GGCAAATATT
CTTGGCTGCG ATCCGATGTG GCTGTTAACT GGTGAGGTTA CTCCTCCGGA GCAACCAAAA
AGTGAGGAGC AGCAACACCA TGACGCATCT CAACAAGTTT GCCCCTTATC TCGCGAAGCT
CTTCTGCGGA AGAACCAATA CCAATGGTGA
 
Protein sequence
MLLQNKNSAI NNRLRTQREA CGLTTAELAR LLDLDEEIII QWESGEYEPT ISMLIPLANI 
LGCDPMWLLT GEVTPPEQPK SEEQQHHDAS QQVCPLSREA LLRKNQYQW