Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E1217 |
Symbol | |
ID | 6272794 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 1123215 |
End bp | 1124144 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641725348 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_001879862 |
Protein GI | 187731666 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.50196 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAACCAC TGCTGGATGT GTTGATGATC CTCGATGCCT TAGAAAAAGA AGGCAGTTTT GCGGCGGCGT CGGCCAAACT CTATAAGACG CCGTCCGCTC TGAGTTACAC CGTTCACAAG CTGGAAAGCG ACCTTAATAT TCAATTGCTT GATCGTAGCG GTCACCGCGC TAAATTCACC CGTACCGGAA AAATGTTATT AGAGAAAGGG CGGGAAGTTC TGCATACCGT GCGAGAACTG GAAAAGCAGG CGATCAAACT GCATGAAGGC TGGGAAAACG AGCTGGTGAT TGGCGTGGAC GACACGTTTC CTTTTTCTCT GCTTGCGCCA CTGATTGAAG CTTTTTATCA ACATCATAGC GTGACGCGCC TGAAGTTTAT CAATGGCGTA CTCGGTGGTT CCTGGGATGC CCTGACTCAG GGGCGAGCGG ATATTATTGT TGGCGCGATG CATGAGCCAC CATCTTCCAG TGAGTTTGGT TTTTCACGGT TGGGCGATCT GGAACAAGTC TTTGCGGTCG CGCCTCATCA TCCGTTAGCC CTGGAAGAAG AGCCGTTAAA CCGTCGTATT ATTAAGCGAT ATCGGGCGAT TGTGGTGGGG GATACTGCGC AGGCAGGCGC TTCTACGGCC TCACAACTTC TCGACGAACA AGAAGCCATT ACCGTTTTCG ATTTTAAAAC CAAGCTGGAG CTGCAAATTA GCGGCCTCGG CTGCGGCTAT TTACCCCGTT ATCTGGCACA ACGTTTTCTC GATAGTGGCG CGTTAATAGA GAAGAAAGTG GTCGCCCAAA CTCTCTTTGA ACCCGTCTGG ATTGGCTGGA ACGAACAGAC CGCAGGGCTT GCCAGCGGCT GGTGGCGGGA TGAAATTTTA GCAAATAGTG CGATCGCCGG TGTTTATGCA AAATCTGATG ACGGAAAATC AGCCATTTAA
|
Protein sequence | MKPLLDVLMI LDALEKEGSF AAASAKLYKT PSALSYTVHK LESDLNIQLL DRSGHRAKFT RTGKMLLEKG REVLHTVREL EKQAIKLHEG WENELVIGVD DTFPFSLLAP LIEAFYQHHS VTRLKFINGV LGGSWDALTQ GRADIIVGAM HEPPSSSEFG FSRLGDLEQV FAVAPHHPLA LEEEPLNRRI IKRYRAIVVG DTAQAGASTA SQLLDEQEAI TVFDFKTKLE LQISGLGCGY LPRYLAQRFL DSGALIEKKV VAQTLFEPVW IGWNEQTAGL ASGWWRDEIL ANSAIAGVYA KSDDGKSAI
|
| |