| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E1193 |
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| Symbol | rfbD |
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| ID | 6268653 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 1099506 |
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| End bp | 1100405 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641725325 |
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| Product | dTDP-4-dehydrorhamnose reductase |
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| Protein accession | YP_001879839 |
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| Protein GI | 187730759 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1091] dTDP-4-dehydrorhamnose reductase |
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| TIGRFAM ID | [TIGR01214] dTDP-4-dehydrorhamnose reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 0.984118 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATATCC TCCTTTTTGG CAAAACAGGG CAGGTAGGTT GGGAACTACA GCGTGCTCTG
GCACCTCTGG GTAATTTGAT TGCTCTTGAT GTTCACTCCA CTGATTACTG TGGTGATTTT
AGTAATCCTG AAGGTGTAGC TGAAACCGTA AGAAGCATTC GGCCTGAGAT TATTGTCAAC
GCAGCCGCTC ACACCGCAGT AGACAAAGCA GAATCAGAAC CGGAGTTTGC ACAATTAATT
AACGCAACAA GTGTCGAAGC GATTGCGAAA GCAGCAAATG AAGTTGGAGC TTGGGTTATC
CATTACTCGA CTGATTACGT CTTCCCTGGA AATGGCGATA TGCCATGGCT GGAGACGGAT
GCAACCGCAC CACTAAATGT TTACGGTGAA ACAAAGTTAG CTGGAGAAAA AGCGTTACAG
GAATATTGCG CGAAGCATCT TATTTTCCGG ACCAGCTGGG TCTATGCAGG AAAAGGAAAT
AACTTCGCCA AAACGATGTT ACGTCTGGCA AAAGAGCGTG AAGAATTAGC GGTTATTAAC
GATCAGTTTG GTGCGCCAAC AGGTGCTGAA CTGCTGGCTG ATTGTACAGC ACATGCCATT
CGTGTCGCAC TGAATAAACC GGATGTCGCA GGCTTGTACC ATTTGGTAGC CAGTGGTACC
ACAACCTGGT ACGATTATGC TGCGCTGGTT TTTGAAGAGG CGCGCAAAGC AGGCATTCCC
CTTGCACTCA ACAAGCTTAA CGCAGTACCA ACAACTGCCT ATCCTACACC AGCTCGGCGT
CCACATAACT CTCGCCTTAA TACAGAAAAA TTTCAGCAGA ATTTTGCGCT TGTCTTGCCT
GACTGGCAGG TTGGTGTGAA ACGCATGTTC AACGAATTAT TTACGACTAC AGCAATTTAA
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| Protein sequence | MNILLFGKTG QVGWELQRAL APLGNLIALD VHSTDYCGDF SNPEGVAETV RSIRPEIIVN
AAAHTAVDKA ESEPEFAQLI NATSVEAIAK AANEVGAWVI HYSTDYVFPG NGDMPWLETD
ATAPLNVYGE TKLAGEKALQ EYCAKHLIFR TSWVYAGKGN NFAKTMLRLA KEREELAVIN
DQFGAPTGAE LLADCTAHAI RVALNKPDVA GLYHLVASGT TTWYDYAALV FEEARKAGIP
LALNKLNAVP TTAYPTPARR PHNSRLNTEK FQQNFALVLP DWQVGVKRMF NELFTTTAI
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