| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E1168 |
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| Symbol | asmA |
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| ID | 6269099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 1068458 |
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| End bp | 1070311 |
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| Gene Length | 1854 bp |
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| Protein Length | 617 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641725301 |
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| Product | putative assembly protein |
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| Protein accession | YP_001879815 |
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| Protein GI | 187732274 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGACGAT TTCTGACGAC GCTGATGATA CTCCTGGTCG TGCTGGTGGC CGGGTTATCT
GCGTTAGTGT TGCTGGTGAA TCCGAATGAT TTCCGCGACT ATATGGTCAA GCAAGTTGCT
GCACGTAGCG GTTATCAATT GCAGCTCGAC GGGCCACTGC GTTGGCACGT CTGGCCGCAG
CTTAGTATCC TCTCCGGGCG AATGTCTCTC ACCGCCCAGG GTGCAAGCCA GCCACTGGTT
CGCGCCGACA ACATGCGTCT GGACGTGGCG CTTTTACCAC TACTGAGTCA TCAACTGAGC
GTTAAGCAGG TGATGCTAAA AGGGGCAGTG ATCCAACTGA CGCCGCAGAC GGAAGCGGTG
CGCAGTGAAG ACGCTCCGGT TGCACCGCGC GACAATACCT TGCCGGATCT GTCAGACGAT
CGCGGATGGT CGTTTGATAT ATCCAGTCTT AAGGTGGCGG ACAGCGTTCT GGTGTTCCAG
CATGAAGATG ACGAGCAGGT GACAATCCGC AATATCCGCC TGCAAATGGA ACAAGATCCC
CAACATCGTG GCTCATTTGA GTTTTCCGGG CGGGTTAATC GCGATCAGCG CGATCTCACG
ATATCCCTTA ACGGTACGGT AGATGCTTCT GATTATCCGC ATGATTTAAC GGCGGCTATT
GAACAAATTA ACTGGCAGTT GCAGGGTGCC GATTTACCAA AACAAGGTAT TCAGGGGCAG
GGGAGTTTCC AGGCCCAGTG GCAGGAGTCA CATAAACGCC TTTCATTTAA CCAAATCAGC
TTGACCGCCA ATGACAGTAC GCTGAGCGGG CAAGCACAGG TTACGCTGAC AGAGAAACCG
GAATGGCAGC TGAGGCTGCA ATTCCCGCAA CTGAATCTTG ACAACCTCAT CCCGCTTAAT
GAAACAGCGA ATGGTGAAAA CGGTGCCGCG CAGCAGGGGC AGAGCCAATC AACGTTGCCG
CGCCCGGTTA TTTCTTCGCG TATTGATGAA CCGGCCTATC AGGGACTGCA AGGCTTTACG
GCTGATATTT TGTTGCAGGT CAGTAACGTG CGCTGGCGCG GAATGAATTT TACAGATGTT
GCCACGCAAA TGACCAACAA GTCGGGTTTG CTGGAAATTA CTCAACTGCA GGGCAAGCTT
AACGGTGGAC AGGTTTCACT GCCGGGCACG CTGGACGCGA CATCAATAAA TCCGCGGATA
AACTTCCAGC CACGGCTGGA AAACGTTGAG ATTGGTACCA TTCTGAAGGC GTTTAACTAT
CCGATTTCGT TGACCGGAAA AATGTCACTG GCTGGTGATT TCTCCGGTGC TGACATAGAT
GCCGACGCAT TCCGCCACAA CTGGCAAGGA CAGGCACATG TCGAAATGAC CGACACGCGC
ATGGAAGGGA TGAACTTCCA GCAGATGATT CAGCAAGCGG TAGAGCGTAA TGGCGGTGAT
GTGAAGGCCG CTGAAAACTT TGATAACGTG ACGCGGCTTG ACCGCTTTAC CACCGATTTG
ACGTTGAAGG ATGGCGTCGT GACGTTAAAC GACATGCAAG GTCAATCGCC TGTGCTGGCG
CTGACAGGGG AAGGCATGTT GAATCTGGCA GATCAAACCT GCGACACCCA GTTTGATATT
CGGGTCGTGG GTGGCTGGAA CGGGGAAAGC AAACTGATTG ATTTCCTGAA AGAAACGCCA
GTACCGCTGC GGGTTTATGG CAACTGGCAG CAACTCAATT ACAGCCTGCA AGTGGATCAG
TTACTGCGCA AACATCTACA GGACGAAGCG AAACGTCGCC TGAATGACTG GGCCGAGCGG
AATAAAGATT CCCGTAATGG CAAAGATGTG AAGAAGTTGC TTGAGAAGAT GTAG
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| Protein sequence | MRRFLTTLMI LLVVLVAGLS ALVLLVNPND FRDYMVKQVA ARSGYQLQLD GPLRWHVWPQ
LSILSGRMSL TAQGASQPLV RADNMRLDVA LLPLLSHQLS VKQVMLKGAV IQLTPQTEAV
RSEDAPVAPR DNTLPDLSDD RGWSFDISSL KVADSVLVFQ HEDDEQVTIR NIRLQMEQDP
QHRGSFEFSG RVNRDQRDLT ISLNGTVDAS DYPHDLTAAI EQINWQLQGA DLPKQGIQGQ
GSFQAQWQES HKRLSFNQIS LTANDSTLSG QAQVTLTEKP EWQLRLQFPQ LNLDNLIPLN
ETANGENGAA QQGQSQSTLP RPVISSRIDE PAYQGLQGFT ADILLQVSNV RWRGMNFTDV
ATQMTNKSGL LEITQLQGKL NGGQVSLPGT LDATSINPRI NFQPRLENVE IGTILKAFNY
PISLTGKMSL AGDFSGADID ADAFRHNWQG QAHVEMTDTR MEGMNFQQMI QQAVERNGGD
VKAAENFDNV TRLDRFTTDL TLKDGVVTLN DMQGQSPVLA LTGEGMLNLA DQTCDTQFDI
RVVGGWNGES KLIDFLKETP VPLRVYGNWQ QLNYSLQVDQ LLRKHLQDEA KRRLNDWAER
NKDSRNGKDV KKLLEKM
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