Gene SbBS512_E1166 details

Gene Information

• Locus tag: SbBS512_E1166
• Symbol: udk
• ID: 6270795
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: +
• Start bp: 1067122
• End bp: 1067763
• Gene Length: 642 bp
• Protein Length: 213 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 641725299
• Product: uridine kinase
• Protein accession: YP_001879813
• Protein GI: 187730402
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0572] Uridine kinase
• TIGRFAM ID: [TIGR00235] uridine kinase

Plasmid Coverage information

• Num covering plasmid clones: 54
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTGATC AGTCTCATCA GTGCGTCATT ATCGGTATCG CTGGCGCATC GGCTTCCGGC 
AAGAGTCTTA TTGCCAGTAC CCTTTATCGT GAATTACGTG AGCAAGTCGG TGATGAACAC 
ATCGGCGTAA TTCCCGAAGA CTGCTATTAC AAAGATCAAA GCCATCTGTC GATGGAAGAA 
CGCGTTAAGA CCAACTACGA CCATCCCAGC GCGATGGATC ACAGCCTGCT GCTTGAGCAT 
TTACAAGCGT TGAAACGCGG CTCGGCAATT GACCTGCCGG TTTACAGCTA TGTTGAACAT 
ACGCGTATGA AAGAAACGGT GACGGTTGAG CCGAAGAAGG TCATCATTCT CGAAGGCATT 
TTGTTGCTGA CGGATGCGCG TTTGCGTGAC GAACTTAACT TCTCCATTTT CGTTGATACC 
CCGCTGGATA TCTGCCTGAT GCGCCGCATC AAGCGTGACG TTAACGAGCG TGGGCGTTCA 
ATGGATTCAG TGATGGCGCA ATATCAAAAA ACCGTGCGCC CGATGTTCCT GCAATTCATT 
GAGCCTTCTA AACAATATGC GGACATTATC GTGCCGCGCG GCGGGAAAAA CCGCATCGCG 
ATCGATATAT TGAAAGCGAA AATAAGTCAG TTCTTTGAAT AA 

 

Protein sequence

MTDQSHQCVI IGIAGASASG KSLIASTLYR ELREQVGDEH IGVIPEDCYY KDQSHLSMEE 
RVKTNYDHPS AMDHSLLLEH LQALKRGSAI DLPVYSYVEH TRMKETVTVE PKKVIILEGI 
LLLTDARLRD ELNFSIFVDT PLDICLMRRI KRDVNERGRS MDSVMAQYQK TVRPMFLQFI 
EPSKQYADII VPRGGKNRIA IDILKAKISQ FFE