| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E1159 |
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| Symbol | mdtA |
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| ID | 6269795 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 1055214 |
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| End bp | 1056461 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641725289 |
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| Product | multidrug efflux system subunit MdtA |
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| Protein accession | YP_001879806 |
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| Protein GI | 187730236 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGGCA GTTATAAATC CCGTTGGGTA ATCGTAATCG TGGTGGTTAT CGCCGCCATC
GCCGCATTCT GGTTCTGGCA AGGCCGCAAT GACTCCCAGA GTGCAGCCCC AGGGGCGACG
AAACAAGCGC AGCAATCGCC AGCGGGTGGT CGCCGTGGTA TGCGTTCCGG CCCATTAGCC
CCGGTTCAGG CGGCGACCGC CGTAGAACAG GCAGTTCCAC GTTACCTCAC CGGGCTTGGC
ACCATTACCG CCGCTAATAC TGTTACGGTG CGCAGCCGCG TGGATGGTCA ACTGATGGCG
TTACATTTCC AGGAAGGCCA GCAGGTCAAA GCAGGCGATT TACTGGCAGA AATTGACCCC
AGCCAGTTCA AAGTTGCATT AGCACAAGCC CAGGGCCAAC TGGCAAAAGA TAAAGCCACG
CTTACCAACG CCCGCCGTGA TCTGGCGCGT TATCAGCAAC TGGCAAAAAC CAATCTCGTC
TCCCGCCAGG AGCTGGATGC CCAACAGGCG CTGGTCAGTG AAACCGAAGG CACCATTAAG
GCTGATGAAG CAAGCGTCGC CAGCGCGCAG CTGCAACTCG ACTGGAGCCG CATCACCGCA
CCAGTCGATG GTCGCGTTGG TCTCAAGCAG GTTGATGTTG GTAACCAAAT CTCCAGTGGT
GATACCACCG GGATCGTGGT GATCACCCAG ACGCATCCTA TCGATTTGCT CTTTACCCTG
CCGGAAAGCG ATATCGCTAC CGTCGTGCAG GCGCAAAAAG CCGGGAAACC GCTGGTGGTA
GAAGCCTGGG ATCGCACCAA CTCGAAGAAA TTAAGTGAAG GCACGCTGTT AAGTCTCGAT
AACCAAATCG ATGCCACTAC CGGTACGATT AAAGTGAAAG CACGCTTTAA TAATCAGGAT
GATGCGCTGT TTCCCAATCA GTTTGTTAAC GCGCGCATGT TAGTCGACAC CGAACAAAAC
GCCGTAGTGA TCCCAACAGC CGCCCTGCAA ATGGGCAATG AAGGCCATTT TGTCTGGGTG
CTGAATAGCG AAAACAAGGT CAGCAAACAT CTGGTGACGC CGGGCATTCA GGACAGTCAG
AAAGTGGTGA TCCGTGCAGG TATTTCTGCG GGCGATCGCG TGGTGACAGA CGGCATTGAT
CGCCTGACCG AAGGGGCGAA AGTGGAAGTG GTGGAAGCCC AGAGCGCCAC CACTCCGGAA
GAGAAAGCCA CCAGCCGCGA ATACGCGAAA AAAGGAGCAC GCTCCTGA
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| Protein sequence | MKGSYKSRWV IVIVVVIAAI AAFWFWQGRN DSQSAAPGAT KQAQQSPAGG RRGMRSGPLA
PVQAATAVEQ AVPRYLTGLG TITAANTVTV RSRVDGQLMA LHFQEGQQVK AGDLLAEIDP
SQFKVALAQA QGQLAKDKAT LTNARRDLAR YQQLAKTNLV SRQELDAQQA LVSETEGTIK
ADEASVASAQ LQLDWSRITA PVDGRVGLKQ VDVGNQISSG DTTGIVVITQ THPIDLLFTL
PESDIATVVQ AQKAGKPLVV EAWDRTNSKK LSEGTLLSLD NQIDATTGTI KVKARFNNQD
DALFPNQFVN ARMLVDTEQN AVVIPTAALQ MGNEGHFVWV LNSENKVSKH LVTPGIQDSQ
KVVIRAGISA GDRVVTDGID RLTEGAKVEV VEAQSATTPE EKATSREYAK KGARS
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