| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E1146 |
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| Symbol | gatC |
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| ID | 6273047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 1037331 |
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| End bp | 1038686 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641725275 |
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| Product | PTS system, galactitol-specific IIC component |
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| Protein accession | YP_001879793 |
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| Protein GI | 187733334 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3775] Phosphotransferase system, galactitol-specific IIC component |
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| TIGRFAM ID | [TIGR00827] PTS system, galactitol-specific IIC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTTCAG AAGTCATGCG TTATATTCTC GACCTCGGCC CTACGGTGAT GCTTCCGATT
GTCATCATTA TTTTTTCTAA AATATTAGGC ATGAAGGCAG GCGATTGCTT TAAAGCGGGT
CTGCATATCG GGATTGGCTT TGTTGGCATT GGCCTTGTGA TTGGCTTAAT GCTGGATTCC
ATTGGTCCGG CGGCGAAAGC GATGGCGGAA AATTTCGACC TGAATCTGCA TGTGGTCGAT
GTCGGCTGGC CGGGCTCTTC ACCAATGACC TGGGCGTCGC AAATTGCGCT GGTGGCGATT
CCGATTGCGA TTCTGGTTAA CGTGGCGATG TTACTGACCC GTATGACGCG GGTGGTAAAT
ATTGATATCT GGAATATCTG GCATATGACC TTCACCGGCG CGTTGCTGCA TCTGGCAACC
GGTTCATGGA TGATAGGGAT GGCAGGTGTG GTAATTCACG CGGCGTTTGT TTATAAGCTC
GGCGACTGGT TTGCCCGCGA TACCCGAAAT TTCTTTGAGC TGGAAGGTAT TGCTATTCCG
CACGGTACGT CGGCGTATAT GGGGCCGATT GCGGTGCTGG TCGATGCTAT CATCGAGAAA
ATCCCAGGCG TTAACCGAAT TAAATTTAGC GCCGACGATA TTCAGCGCAA ATTTGGTCCA
TTTGGCGAGC CTGTCACCGT GGGTTTTGTG ATGGGGCTGA TTATCGGCAT CCTCGCGGGT
TACGATGTCA AAGGTGTATT GCAGCTGGCG GTAAAAACGG CGGCAGTGAT GCTGCTAATG
CCACGGGTGA TTAAACCCAT CATGGATGGT TTAACGCCCA TCGCTAAGCA GGCCCGTAGT
CGTTTACAGG CGAAGTTCGG CGGTCAGGAG TTCCTGATTG GCCTGGATCC CGCATTACTG
CTGGGGCATA CGGCGGTGGT ATCGGCAAGC CTGATTTTTA TCCCGCTCAC CATTTTAATT
GCTGTTTGTG TTCCGGGTAA TCAGGTGCTG CCGTTTGGCG ATCTTGCCAC CATCGGCTTC
TTTGTGGCGA TGGCAGTCGC CGTGCATCGT GGAAATCTGT TCCGCACCTT AATCTCGGGT
GTCATCATCA TGAGCATCAC TCTGTGGATC GCGACGCAAA CTATTGGTTT GCACACCCAA
CTGGCGGCTA ATGCTGGGGC GTTAAAAGCC GGGGGTATGG TGACTTCAAT GGATCAGGGC
GGTTCTCCCA TTACCTGGTT ACTGATTCAG GTTTTCTCCC CGCAAAATAT TCCCGGTTTC
ATTATTATCG GTGCAATTTA TCTGACCGGT ATTTTCATGA CCTGGCGTAG AGCGCGTGGC
TTTATTAAAC AAGAGAAAGT CGTTCTCGCA GAATAA
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| Protein sequence | MFSEVMRYIL DLGPTVMLPI VIIIFSKILG MKAGDCFKAG LHIGIGFVGI GLVIGLMLDS
IGPAAKAMAE NFDLNLHVVD VGWPGSSPMT WASQIALVAI PIAILVNVAM LLTRMTRVVN
IDIWNIWHMT FTGALLHLAT GSWMIGMAGV VIHAAFVYKL GDWFARDTRN FFELEGIAIP
HGTSAYMGPI AVLVDAIIEK IPGVNRIKFS ADDIQRKFGP FGEPVTVGFV MGLIIGILAG
YDVKGVLQLA VKTAAVMLLM PRVIKPIMDG LTPIAKQARS RLQAKFGGQE FLIGLDPALL
LGHTAVVSAS LIFIPLTILI AVCVPGNQVL PFGDLATIGF FVAMAVAVHR GNLFRTLISG
VIIMSITLWI ATQTIGLHTQ LAANAGALKA GGMVTSMDQG GSPITWLLIQ VFSPQNIPGF
IIIGAIYLTG IFMTWRRARG FIKQEKVVLA E
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