Gene SbBS512_E1142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E1142 
SymbolgatY 
ID6271547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp1034405 
End bp1035259 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content53% 
IMG OID641725271 
Producttagatose-bisphosphate aldolase 
Protein accessionYP_001879789 
Protein GI187731473 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0191] Fructose/tagatose bisphosphate aldolase 
TIGRFAM ID[TIGR00167] ketose-bisphosphate aldolases
[TIGR01858] class II aldolase, tagatose bisphosphate family 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.0660554 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACGTGG TATCGACAAA GCAGATGCTG AACAACGCAC AGCGCGGCGG TTATGCGGTT 
CCGGCATTCA ATATTCACAA TCTCGAAACG ATGCAAGTGG TGGTGGAAAC CGCTGCCAAC
CTGCATGCGC CGGTCATCAT CGCCGGAACG CCTGGCACAT TTACTCATGC TGGTACAGAA
AATCTGTTGG CGCTGGTCAG CGCGATGGCG AAGCAATATC ACCATCCACT GGCAATTCAT
CTCGACCATC ACACGAAATT TGACGATATC GCTCAGAAGG TTCGTTCTGG CGTGCGCTCA
GTCATGATTG ACGCCTCGCA TTTGCCTTTT GCGCAAAATA TTTCACGGGT CAAAGAGGTG
GTGGATTTTT GCCATCGCTT TGATGTCAGC GTCGAAGCGG AGCTGGGGCA ACTTGGCGGC
CAGGAAGATG ATGTGCAAGT CAATGAAGCC GATGCTTTTT ATACCAACCC CGCTCAGGCG
CGTGAATTTG CCGAGGCAAC CGGAATTGAT TCCCTGGCGG TCGCCATCGG CACGGCTCAT
GGTATGTATG CCAGCGCACC GGCGCTTGAT TTTTCTCGAC TGGAGAACAT TCGCCAGTGG
GTGAACTTAC CGCTGGTGCT GCATGGCGCG TCAGGATTAT CGACTAAGGA TATTCAGCAA
ACCATCAAAC TGGGGATATG CAAAATCAAC GTTGCAACGG AGCTGAAAAA TGCCTTCTCG
CAGGCGTTAA AAAATTACCT GACCGAGCAC CCCGAAGCGA CCGATCCCCG GGATTATTTG
CAGTCGGCTA AATCCGCAAT GCGCGATGTG GTGAGCAAAG TGATTGCCGA TTGTGGCTGC
GAGGGCAGGG CATAA
 
Protein sequence
MYVVSTKQML NNAQRGGYAV PAFNIHNLET MQVVVETAAN LHAPVIIAGT PGTFTHAGTE 
NLLALVSAMA KQYHHPLAIH LDHHTKFDDI AQKVRSGVRS VMIDASHLPF AQNISRVKEV
VDFCHRFDVS VEAELGQLGG QEDDVQVNEA DAFYTNPAQA REFAEATGID SLAVAIGTAH
GMYASAPALD FSRLENIRQW VNLPLVLHGA SGLSTKDIQQ TIKLGICKIN VATELKNAFS
QALKNYLTEH PEATDPRDYL QSAKSAMRDV VSKVIADCGC EGRA