Gene SbBS512_E1138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E1138 
Symbol 
ID6270596 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp1028843 
End bp1029589 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content51% 
IMG OID641725266 
Producttranscriptional regulator, GntR family 
Protein accessionYP_001879784 
Protein GI187733544 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.252402 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACAAG CGCATACCCA GCTGATTGCC CAACTGAACG AACGTATTTT AGCGGCGGAT 
AACACGCCGC TTTATATTAA GTTTGCCGAA ACGGTAAAAA ATGCCGTGCG CAGCGGGGTG
CTGGAGCATG GCAATATTTT GCCCGGTGAG CGTGATTTAA GTCAGTTAAC CGGCGTTTCG
CGCATTACGG TGCGCAAGGC GATGCAGGCG CTGGAAGAAG AGGGTGTGGT GACGCGTTCG
CGTGGTTACG GCACGCAGAT CAACAACATC TTCGAATACT CGTTGAAAGA AGCGCGAGGT
TTTTCTCAGC AGGTGGTATT GCGCGGGAAA AAGCCCGATA CGCTATGGGT TAACAAGCGT
GTCGTGAAAT GTCCCGAAGA AGTCGCGCAG CAGCTGGCGG TCGAAGCAGG AAGTGATGTC
TTTTTGCTTA AGCGTATTCG CTATGTCGAT GAAGAAGCGG TATCGATTGA GGAATCGTGG
GTTCCGGCGC ATTTAATTCA TGATGTTGAT GCCATCGGGA TTTCACTTTA TGACTATTTC
CGCAGCCAGC ACATTTACCC ACAACGTACG CGTTCCCGCG TTAGCGCCCG GATGCCGGAT
GCCGAGTTTC AGTCACATAT TCAGTTAGAT AGCAAAATAC CGGTGCTGGT GATCAAGCAA
GTGGCGCTTG ACCAACAGCA ACGGCCTATT GAGTACAGCA TTAGCCACTG TCGCAGCGAT
CTATACGTTT TTGTGTGCGA GGAGTAG
 
Protein sequence
MEQAHTQLIA QLNERILAAD NTPLYIKFAE TVKNAVRSGV LEHGNILPGE RDLSQLTGVS 
RITVRKAMQA LEEEGVVTRS RGYGTQINNI FEYSLKEARG FSQQVVLRGK KPDTLWVNKR
VVKCPEEVAQ QLAVEAGSDV FLLKRIRYVD EEAVSIEESW VPAHLIHDVD AIGISLYDYF
RSQHIYPQRT RSRVSARMPD AEFQSHIQLD SKIPVLVIKQ VALDQQQRPI EYSISHCRSD
LYVFVCEE