| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E1071 |
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| Symbol | fliR |
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| ID | 6270704 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 977577 |
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| End bp | 978362 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641725210 |
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| Product | flagellar biosynthesis protein FliR |
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| Protein accession | YP_001879729 |
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| Protein GI | 187733359 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
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| TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00000000309979 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATGCAGG TGACAAGCGA TCAATGGCTT TCCTGGTTAA GCCTGTACTT CTGGCCGTTA
CTGCGCGTGC TGGCGCTCAT TTCTACCGCA CCAATTCTGA GCGAACGCAG CGTGCCGAAA
CGGGTAAAAC TGGGGCTGGC AATGATGATC ACGTTCGTCA TTGCCCCATC ATTACCTGCC
AACGATGTTC CTGTTTTTTC GTTCTTTGCT CTGTGGCTGG CCGTGCAGCA GATCCTGATC
GGCATTGCGC TTGGTTTTAC CATGCAATTT GCCTTTGCCG CTGTGCGAAC CGCTGGCGAA
ATTATCGGTC TGCAAATGGG GCTGTCATTT GCGACGTTTG TCGATCCGGC CAGCCATCTC
AATATGCCCG TTTTAGCGCG TATCATGGAT ATGCTGGCGT TACTGCTGTT CCTGACATTT
AACGGTCATT TATGGTTGAT TTCACTGCTG GTCGATACCT TTCACACCCT GCCAATTGGT
GGCGAACCGT TGAACAGCAA TGCGTTTCTG GCACTCACCA AAGCGGGGAG TTTGATTTTC
CTTAACGGGC TGATGCTGGC GTTACCGCTC ATTACTCTGC TGCTGCCCCT GAATCTGGCA
TTAGGTTTAC TGAATCGTAT GGCCCCGCAA TTATCCATTT TTGTTATTGG ATTTCCATTA
ACTCTGACTG TCGGTATCTC TTTAATGGCG GCATTAATGC CGTTAATTGC ACCTTTTTGC
GAACATTTAT TCAGTGAGAT GTTTAATTTG CTGGCTGATA TTATTAGTGA ATTGCCATTA
ATATAA
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| Protein sequence | MMQVTSDQWL SWLSLYFWPL LRVLALISTA PILSERSVPK RVKLGLAMMI TFVIAPSLPA
NDVPVFSFFA LWLAVQQILI GIALGFTMQF AFAAVRTAGE IIGLQMGLSF ATFVDPASHL
NMPVLARIMD MLALLLFLTF NGHLWLISLL VDTFHTLPIG GEPLNSNAFL ALTKAGSLIF
LNGLMLALPL ITLLLPLNLA LGLLNRMAPQ LSIFVIGFPL TLTVGISLMA ALMPLIAPFC
EHLFSEMFNL LADIISELPL I
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