Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E1048 |
Symbol | fliY |
ID | 6273251 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 961853 |
End bp | 962653 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641725190 |
Product | cystine transporter subunit |
Protein accession | YP_001879709 |
Protein GI | 187732594 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.202301 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTAG CACATCTGGG ACGTCAGGCA TTGATGGGTG TGATGGCCGT GGCGCTGGTT GCGGGCATGA GCGTTAAAAG TTTTGCAGAT GAAGGTCTGC TTAATAAAGT CAAAGAGCGC GGTACGCTAC TGGTAGGGCT GGAAGGAACT TATCCGCCGT TCAGTTTTCA GGGGGATGAC GGCAAATTAA CCGGTTTTGA AGTGGAATTT GCCCAACAGC TGGCAAAACA TCTTGGCGTT GAGGCGTCAC TAAAACCGAC CAAATGGGAC GGTATGCTAG CGTCGCTGGA CTCTAAACGT ATTGATGTGG TGATTAATCA GGTCACCATT TCTGATGAGC GCAAGAAAAA ATACGATTTC TCTACCCCGT ACACCATTTC TGGTATTCAG GCGCTGGTGA AAAAAGGTAA CGAAGGCACC ATTAAAACGG CTGCTGATCT GAAAGGCAAA AAAGTGGGTG TCGGTCTGGG CACCAACTAT GAAGAGTGGC TGCGGCAGAA TGTTCAGGGC GTCGATGTGC GTACCTATGA TGATGACCCG ACCAAATATC AGGATCTGCG CGTAGGCCGT ATCGATGCGA TCCTCGTTGA CCGTCTGGCG GCGCTGGATC TGGTGAAGAA AACCAACGAT ACGCTGGCAG TAACCGGTGA AGCATTCTCC CGTCAGGAGT CTGGCGTGGC GCTGCGTAAA GGAAATGAAG ACCTGCTGAA AGCAGTGAAC GATGCAATTG CGGAAATGCA AAAAGATGGC ACTCTGCAAG CCCTTTCCGA AAAATGGTTT GGTGCTGATG TGACCAAATA A
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Protein sequence | MKLAHLGRQA LMGVMAVALV AGMSVKSFAD EGLLNKVKER GTLLVGLEGT YPPFSFQGDD GKLTGFEVEF AQQLAKHLGV EASLKPTKWD GMLASLDSKR IDVVINQVTI SDERKKKYDF STPYTISGIQ ALVKKGNEGT IKTAADLKGK KVGVGLGTNY EEWLRQNVQG VDVRTYDDDP TKYQDLRVGR IDAILVDRLA ALDLVKKTND TLAVTGEAFS RQESGVALRK GNEDLLKAVN DAIAEMQKDG TLQALSEKWF GADVTK
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