Gene SbBS512_E1048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E1048 
SymbolfliY 
ID6273251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp961853 
End bp962653 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content50% 
IMG OID641725190 
Productcystine transporter subunit 
Protein accessionYP_001879709 
Protein GI187732594 
COG category[T] Signal transduction mechanisms
[E] Amino acid transport and metabolism 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.202301 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTAG CACATCTGGG ACGTCAGGCA TTGATGGGTG TGATGGCCGT GGCGCTGGTT 
GCGGGCATGA GCGTTAAAAG TTTTGCAGAT GAAGGTCTGC TTAATAAAGT CAAAGAGCGC
GGTACGCTAC TGGTAGGGCT GGAAGGAACT TATCCGCCGT TCAGTTTTCA GGGGGATGAC
GGCAAATTAA CCGGTTTTGA AGTGGAATTT GCCCAACAGC TGGCAAAACA TCTTGGCGTT
GAGGCGTCAC TAAAACCGAC CAAATGGGAC GGTATGCTAG CGTCGCTGGA CTCTAAACGT
ATTGATGTGG TGATTAATCA GGTCACCATT TCTGATGAGC GCAAGAAAAA ATACGATTTC
TCTACCCCGT ACACCATTTC TGGTATTCAG GCGCTGGTGA AAAAAGGTAA CGAAGGCACC
ATTAAAACGG CTGCTGATCT GAAAGGCAAA AAAGTGGGTG TCGGTCTGGG CACCAACTAT
GAAGAGTGGC TGCGGCAGAA TGTTCAGGGC GTCGATGTGC GTACCTATGA TGATGACCCG
ACCAAATATC AGGATCTGCG CGTAGGCCGT ATCGATGCGA TCCTCGTTGA CCGTCTGGCG
GCGCTGGATC TGGTGAAGAA AACCAACGAT ACGCTGGCAG TAACCGGTGA AGCATTCTCC
CGTCAGGAGT CTGGCGTGGC GCTGCGTAAA GGAAATGAAG ACCTGCTGAA AGCAGTGAAC
GATGCAATTG CGGAAATGCA AAAAGATGGC ACTCTGCAAG CCCTTTCCGA AAAATGGTTT
GGTGCTGATG TGACCAAATA A
 
Protein sequence
MKLAHLGRQA LMGVMAVALV AGMSVKSFAD EGLLNKVKER GTLLVGLEGT YPPFSFQGDD 
GKLTGFEVEF AQQLAKHLGV EASLKPTKWD GMLASLDSKR IDVVINQVTI SDERKKKYDF
STPYTISGIQ ALVKKGNEGT IKTAADLKGK KVGVGLGTNY EEWLRQNVQG VDVRTYDDDP
TKYQDLRVGR IDAILVDRLA ALDLVKKTND TLAVTGEAFS RQESGVALRK GNEDLLKAVN
DAIAEMQKDG TLQALSEKWF GADVTK