Gene SbBS512_E1040 details

Gene Information

• Locus tag: SbBS512_E1040
• Symbol: uvrC
• ID: 6268709
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: -
• Start bp: 955144
• End bp: 956976
• Gene Length: 1833 bp
• Protein Length: 610 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 641725182
• Product: excinuclease ABC subunit C
• Protein accession: YP_001879701
• Protein GI: 187730924
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0322] Nuclease subunit of the excinuclease complex
• TIGRFAM ID: [TIGR00194] excinuclease ABC, C subunit

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.0000000000190411
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGTGATC AGTTTGACGC AAAAGCGTTT TTAAAAACCG TAACCAGCCA GCCAGGCGTT 
TATCGCATGT ACGATGCTGG TGGTACGGTT ATCTATGTAG GCAAAGCGAA AGACCTGAAA 
AAACGGCTTT CCAGCTATTT CCGTAGCAAC CTCGCTTCGC GCAAAACCGA AGCGCTGGTC 
GCCCAGATTC AGCAAATTGA TGTAACGGTT ACTCATACAG AAACCGAAGC GCTGTTGCTG 
GAACACAACT ACATCAAACT CTATCAGCCG CGTTACAACG TTTTGCTACG CGATGATAAA 
TCTTATCCTT TTATCTTCCT GAGTGGCGAT ACCCACCCGC GTCTGGCGAT GCATCGTGGT 
GCGAAGCATG CCAAAGGTGA ATATTTCGGC CCGTTCCCGA ATGGCTATGC CGTACGTGAA 
ACTCTGGCGC TACTGCAAAA GATTTTCCCC ATTCGCCAGT GCGAAAATAG TGTTTATCGC 
AATCGCTCGC GTCCGTGTCT GCAATATCAG ATAGGGCGCT GTCTGGGACC GTGCGTTGAA 
GGACTGGTGA GTGAAGAAGA ATACGCTCAG CAGGTCGAGT ATGTGCGCCT GTTTTTGTCT 
GGCAAAGATG ATCAGGTGCT TACGCAACTC ATTAGCCGTA TGGAAACTGC CAGTCAGAAT 
CTGGAGTTTG AAGAAGCGGC ACGTATTCGC GACCAAATTC AGGCGGTGCG ACGCGTCACC 
GAAAAACAGT TTGTTTCCAA TACCGGCAAC GACCTTGACG TTATTGGTGT GGCGTTCGAT 
GCGGGCATGG CTTGTGTCCA CGTATTGTTC ATTCGTCAGG GCAAAGTGCT CGGCAGCCGC 
AGCTATTTCC CGAAAGTGCC TGGCGGTACG GAACTGAGCG AGGTGGTAGA AACCTTCGTA 
GGTCAGTTCT ATTTACAAGG CAGCCAGATG CGCACCTTAC CGGGTGAGAT CCTGCTCGAT 
TTTAATCTTA GCGATAAAAC GCTGCTCGCC GATTCCCTTT CAGAACTGGC GGGACGCAAG 
ATTAATGTTC AAACCAAACC TCGCGGCGAT AGGGCGCGTT ATCTGAAACT CGCGCGCACC 
AATGCGGCGA CGGCCTTAAT CAGCAAACTT TCGCAGCAAT CTACCGTTCA CCAGCGACTG 
ACCGCGCTTG CCAGCGTGTT GAAATTGCCG GAAGTGAAGC GGATGGAGTG CTTTGACATC 
AGCCATACCA TGGGCGAACA AACCGTCGCT TCCTGTGTGG TGTTTGATGC TAACGGCCCG 
CTGCGTGCGG AGTATCGGCG CTATAACATT ACAGGCATCA CGCCGGGCGA TGATTATGCG 
GCGATGAATC AGGTGCTGCG TCGGCGTTAT GGTAAAGCCA TTGACGACAG TAAGATCCCG 
GATGTGATCC TTATCGACGG CGGCAAAGGC CAGCTTGCGC AGGCGAAAAA TGTCTTCGCC 
GAACTGGATG TCTCATGGGA TAAAAATCAT CCGCTGCTAC TTGGCGTTGC CAAAGGAGCA 
GATCGTAAGG CTGGACTGGA AACGCTGTTC TTTGAGCCGG AAGGTGAGGG ATTTAGTTTG 
CCGCCAGATT CACCCGCGCT GCATGTTATC CAGCATATTC GCGATGAATC ACATGATCAC 
GCGATTGGCG GGCACCGTAA AAAACGGGCG AAGGTCAAAA ATACCAGTTC CCTGGAAACC 
ATTGAAGGCG TCGGGCCAAA ACGTCGGCAA ATGTTGTTGA AATATATGGG CGGTTTGCAA 
GGTTTACGTA ACGCCAGCGT CGAGGAAATT GCAAAAGTGC CGGGTATTTC GCAAGGTCTG 
GCAGAAAAGA TCTTCTGGTC GTTGAAACAT TGA 

 

Protein sequence

MSDQFDAKAF LKTVTSQPGV YRMYDAGGTV IYVGKAKDLK KRLSSYFRSN LASRKTEALV 
AQIQQIDVTV THTETEALLL EHNYIKLYQP RYNVLLRDDK SYPFIFLSGD THPRLAMHRG 
AKHAKGEYFG PFPNGYAVRE TLALLQKIFP IRQCENSVYR NRSRPCLQYQ IGRCLGPCVE 
GLVSEEEYAQ QVEYVRLFLS GKDDQVLTQL ISRMETASQN LEFEEAARIR DQIQAVRRVT 
EKQFVSNTGN DLDVIGVAFD AGMACVHVLF IRQGKVLGSR SYFPKVPGGT ELSEVVETFV 
GQFYLQGSQM RTLPGEILLD FNLSDKTLLA DSLSELAGRK INVQTKPRGD RARYLKLART 
NAATALISKL SQQSTVHQRL TALASVLKLP EVKRMECFDI SHTMGEQTVA SCVVFDANGP 
LRAEYRRYNI TGITPGDDYA AMNQVLRRRY GKAIDDSKIP DVILIDGGKG QLAQAKNVFA 
ELDVSWDKNH PLLLGVAKGA DRKAGLETLF FEPEGEGFSL PPDSPALHVI QHIRDESHDH 
AIGGHRKKRA KVKNTSSLET IEGVGPKRRQ MLLKYMGGLQ GLRNASVEEI AKVPGISQGL 
AEKIFWSLKH