Gene SbBS512_E1023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E1023 
SymbolaraH 
ID6268609 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp944907 
End bp945893 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content51% 
IMG OID641725166 
ProductL-arabinose transporter permease protein 
Protein accessionYP_001879688 
Protein GI187732756 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTCTG TTTCTACATC GGGTTCTGGC GCACCTAAGT CGTCATTCAG CTTCGGGCGT 
ATCTGGGATC AGTACGGCAT GCTGGTGGTG TTTGCGGTGC TCTTTATCGC CTGTGCCATT
TTTGTCCCAA ATTTTGCCAC CTTCATTAAT ATGAAAGGGT TGGGCCTGGC AATTTCCATG
TCGGGGATGG TGGCGTGTGG CATGTTGTTC TGCCTTGCTT CCGGTGACTT TGACCTTTCT
GTCGCCTCCG TAATTGCCTG TGCGGGTGTC ACCACGGCGG TGGTTATCAA CCTGACTGAA
AGCCTGTGGA TTGGCGTGGC AGCGGGGTTG CTGCTTGGCA TTCTCTGTGG CCTGGTCAAT
GGCTTTGTTA TCGCCAAACT GAAAATAAAT GCTCTGATCA CAACACTGGC AACGATGCAG
ATTGTTCGAG GTCTGGCGTA CATCATTTCA GACGGTAAAG CGGTCGGTAT CGAAGATGAA
AGCTTCTTTG CCCTTGGTTA CGCTAACTGG TTCGGTCTGC CTGCGCCAAT CTGGCTCACC
GTCGCGTGTC TGATTATCTT TGGTTTGTTG CTGAATAAAA CCACCTTTGG TCGTAACACC
CTGGCGATTG GCGGGAACGA AGAGGCTGCG CGTCTGGCGG GTGTACCGGT TGTTCGCACC
AAAATTATTA TCTTTGTTCT CTCTGGCCTG GTATCTGCGA TAGCCGGAAT TATTCTGGCT
TCACGTATGA CCAGTGGGCA GCCAATGACG TCGATTGGTT ACGAGCTGAT TGTTATCTCC
GCCTGCGTTT TAGGTGGCGT TTCTCTGAAA GGAGGCATCG GAAAAATCTC ATATGTGGTG
GCGGGTATCT TAATTTTAGG CACCGTGGAA AACGCCATGA ACCTGCTTAA TATTTCTCCT
TTCGCGCAGT ACGTGGTTCG CGGCTTAATC CTGCTGGCAG CGGTGATCTT CGACCGTTAC
AAGCAAAAAG CGAAACGCAC TGTCTGA
 
Protein sequence
MSSVSTSGSG APKSSFSFGR IWDQYGMLVV FAVLFIACAI FVPNFATFIN MKGLGLAISM 
SGMVACGMLF CLASGDFDLS VASVIACAGV TTAVVINLTE SLWIGVAAGL LLGILCGLVN
GFVIAKLKIN ALITTLATMQ IVRGLAYIIS DGKAVGIEDE SFFALGYANW FGLPAPIWLT
VACLIIFGLL LNKTTFGRNT LAIGGNEEAA RLAGVPVVRT KIIIFVLSGL VSAIAGIILA
SRMTSGQPMT SIGYELIVIS ACVLGGVSLK GGIGKISYVV AGILILGTVE NAMNLLNISP
FAQYVVRGLI LLAAVIFDRY KQKAKRTV