| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E0970 |
|---|
| Symbol | nac |
|---|
| ID | 6270200 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | + |
|---|
| Start bp | 893241 |
|---|
| End bp | 894164 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641725122 |
|---|
| Product | nitrogen assimilation transcriptional regulator |
|---|
| Protein accession | YP_001879648 |
|---|
| Protein GI | 187733189 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.000000000243153 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACTTCA GACGCCTGAA ATACTTCGTA AAAATTGTAG ATATTGGTAG CCTGACCCAG
GCTGCTGAAG TATTGCATAT CGCACAACCA GCGCTCAGCC AGCAGGTTGC CACACTGGAA
GGTGAGTTAA ATCAACAACT TTTGATCCGT ACAAAGCGGG GCGTTACGCC AACAGACGCC
GGAAAAATTC TCTATACCCA TGCGCGGGCC ATTTTACGTC AGTGTGAACA GGCCCAACTG
GCGGTGCATA ACGTTGGTCA GGCATTATCG GGGCAAGTCT CGATTGGCTT TGCACCAGGA
ACCGCTGCGT CATCCATCAC CATGCCCTTA TTACAGGCGG TTCGCGCTGA ATTTCCGGAG
ATCGTTATCT ATCTTCATGA AAATAGTGGT GCAGTGCTTA ACGAAAAATT GATAAATCAC
CAACTCGATA TGGCGGTGAT TTATGAGCAT TCCCCTGTGG CTGGTGTATC CAGTCAGGCT
TTGCTGAAAG AAGATCTTTT TCTGGTAGGA ACTCAAGATT GCCCGGGGCA AAGCGTTGAT
GTGAATGCTA TTGCGAAAAT GAACCTCTTT CTCCCCAGTG ATTACAGTGC TATTAGACTT
CGTGTTGATG AGGCTTTTTC CTTACGGCGA CTCACAGCAA AAGTCATTGG TGAAATTGAG
TCTATTGCCA CGCTTACCGC AGCGATTGCA AGCGGCATGG GCGTTGCAGT ATTACCCGAA
TCGGCCGCGC GTTCGTTATG TGGCGCAGTA AATGGGTGGA TGTCACGCAT TACCACTCCT
TCCATGAGTC TCTCTTTGTC ATTAAATTTA CCCGCCAGAG CGAACTTATC GCCACAGGCA
CAGGCACAGG CAGTGAAAGA GTTGTTAATG TCAGTGATTA GTTCCCCAGT GATGGAAAAA
AGGCAGTGGC AATTGGTGAG CTAA
|
|---|
| Protein sequence | MNFRRLKYFV KIVDIGSLTQ AAEVLHIAQP ALSQQVATLE GELNQQLLIR TKRGVTPTDA
GKILYTHARA ILRQCEQAQL AVHNVGQALS GQVSIGFAPG TAASSITMPL LQAVRAEFPE
IVIYLHENSG AVLNEKLINH QLDMAVIYEH SPVAGVSSQA LLKEDLFLVG TQDCPGQSVD
VNAIAKMNLF LPSDYSAIRL RVDEAFSLRR LTAKVIGEIE SIATLTAAIA SGMGVAVLPE
SAARSLCGAV NGWMSRITTP SMSLSLSLNL PARANLSPQA QAQAVKELLM SVISSPVMEK
RQWQLVS
|
|---|
| |