Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E0833 |
Symbol | |
ID | 6268428 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 780808 |
End bp | 782244 |
Gene Length | 1437 bp |
Protein Length | 478 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641725005 |
Product | multidrug resistance outer membrane protein MdtQ |
Protein accession | YP_001879532 |
Protein GI | 187730411 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCGTG ATTCCTTTTA TCCAGCCATC GCCTGTTTTC CGCTGTTACT GATGCTGGCC GGGTGTGCGC CTATGCATGA AACCCGCCAG GCGTTAAGCC AGCAAACGCC CGCTGCACAA GTTGACACCG CATTACCCAC GGCGCTGAAA AATGGTTGGC CAGACAGCCA ATGGTGGCTG GAGTATCACG ATAATCAGCT CACTTCATTA ATTAACAATG CACTACAGAA CGCACCGGAT ATGCAGGTGG CTGAACAGCG CATTCAGCTA GCTGAAGCCC AGGCGAAGGC AGTTGCCACT CAGGATGGTC CGCAGATCGA CTTTTCGGCG GATATGGAGC GGCAAAAAAT GTCGGCAGAA GGGCTAATGG GGCCGTTTGC TCTGAACGAT CCGGCCGCAG GTACGACCGG TCCGTGGTAC ACCAACGGAA CTTTTGGCTT AACGGCGGGC TGGCATCTCG ATATCTGGGG AAAGAATCGG GCGGAGGTTA CTGCCCGCCT GGGTACGGTT AAAGCACGGG CGGCGGAACG CGAGCAAACC CGCCAATTGC TGGCTGGCAG CGTAGCCCGC CTGTACTGGG AGTGGCAAAC CCAGGCGGCG TTAAACACGG TCTTGCAGCA AATAGAAAAA GAGCAGAACA CCATTATCGC GACCGATCGC CAGCTATATC AGAACGGGAT TACTTCTTCA GTTGACGGTG TGGAAACCGA TATTAATGCC AGCAAAACCC GGCAGCAGCT CAACGATGTC GCGGGGAAAA TGAAAATTAT TGAGGCACGG TTAAGCGCAC TTACAAATCA CCAGACAAAG TCATTGAAGC TTAAACCGGT CGCGTTGCCG AAAGTGGCAA GCCAGCTTCC TGATGAACTG GGGTACTCCT TACTGGCCCG GCGGGCAGAT TTGCAGGCGG CGCACTGGTA CGTTGAGTCA TCGCTAAGCA CCATTGATGC GGCAAAAGCG GCATTTTATC CTGACATCAA CCTGATGGCC TTCCTGCAAC AGGATGCGTT GCACTTAAGC GATCTGTTCC GTCATTCCGC GCAGCAAATG GGCGTTACGG CAGGCCTGAC GCTACCTATT TTCGATAGTG GTCGTCTTAA CGCCAATCTC GATATCGCAA AAGCCGAAAG CAACTTGTCT ATCACCAGCT ACAACAAAGC GGTGGTTGAA GCGGTGAATG ACGTGGCGCG GGCAGCCAGT CAGGTTCAGA CACTTGCGGA GAAAAACCAG CATCAGGCGC AAATTGAGCG CGATGCCTTG CGTGTGGTAG GTCTTGCGCA GGCGCGCTTT AACGCGGGCA TCATTGCTGG TTCCCGCGTC AGCGAAGCCA GAATCCCCGC GCTGCGTGAG CGGGCCAATG GCCTGTTATT GCAAGGGCAG TGGCTGGATG CTTCCATTCA ACTCACTGGT GCGTTGGGCG GGGGTTACAA ACGCTGA
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Protein sequence | MNRDSFYPAI ACFPLLLMLA GCAPMHETRQ ALSQQTPAAQ VDTALPTALK NGWPDSQWWL EYHDNQLTSL INNALQNAPD MQVAEQRIQL AEAQAKAVAT QDGPQIDFSA DMERQKMSAE GLMGPFALND PAAGTTGPWY TNGTFGLTAG WHLDIWGKNR AEVTARLGTV KARAAEREQT RQLLAGSVAR LYWEWQTQAA LNTVLQQIEK EQNTIIATDR QLYQNGITSS VDGVETDINA SKTRQQLNDV AGKMKIIEAR LSALTNHQTK SLKLKPVALP KVASQLPDEL GYSLLARRAD LQAAHWYVES SLSTIDAAKA AFYPDINLMA FLQQDALHLS DLFRHSAQQM GVTAGLTLPI FDSGRLNANL DIAKAESNLS ITSYNKAVVE AVNDVARAAS QVQTLAEKNQ HQAQIERDAL RVVGLAQARF NAGIIAGSRV SEARIPALRE RANGLLLQGQ WLDASIQLTG ALGGGYKR
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