| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E0830 |
|---|
| Symbol | |
|---|
| ID | 6272102 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | - |
|---|
| Start bp | 778511 |
|---|
| End bp | 778909 |
|---|
| Gene Length | 399 bp |
|---|
| Protein Length | 132 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641725003 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001879530 |
|---|
| Protein GI | 187731412 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1380] Putative effector of murein hydrolase LrgA |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAAGA CACTGAACAT TATCTGGCAA TATTTACGCG CTTTCGTCCT GATTTATGCC
TGCCTGTATG CAGGCATTTT CATTGCTTCC CTGCTACCGG TAACCATTCC GGGCAGCATC
ATCGGGATGC TGATCCTGTT TGTCCTGCTG GCCTTGCAAA TTCTTCCGGC AAAATGGGTC
AATCCGGGGT GCTACGTACT GATTCGCTAT ATGGCGCTAT TGTTTGTGCC GATTGGCGTA
GGCGTCATGC AATATTTTGA TTTGCTCCGC GCGCAGTTTG GCCCGGTAGT GGTTTCCTGT
GCTGTCTGTA CGCTGGTGGT TTTTCTGGTG GTGAGCTGGA GTTCACAACT GGTACACGGC
GAACGTAAAG TCGTAGGTCA GAAAGGATCA GAAGAATGA
|
|---|
| Protein sequence | MSKTLNIIWQ YLRAFVLIYA CLYAGIFIAS LLPVTIPGSI IGMLILFVLL ALQILPAKWV
NPGCYVLIRY MALLFVPIGV GVMQYFDLLR AQFGPVVVSC AVCTLVVFLV VSWSSQLVHG
ERKVVGQKGS EE
|
|---|
| |