| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E0807 |
|---|
| Symbol | nfo |
|---|
| ID | 6270337 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | - |
|---|
| Start bp | 756410 |
|---|
| End bp | 757267 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641724983 |
|---|
| Product | endonuclease IV |
|---|
| Protein accession | YP_001879510 |
|---|
| Protein GI | 187730213 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0648] Endonuclease IV |
|---|
| TIGRFAM ID | [TIGR00587] apurinic endonuclease (APN1) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATACA TTGGAGCGCA CGTTAGTGCT GCTGGCGGTC TGGCAAATGC CGCAATTCGC
GCCGCCGAAA TCGACGCAAC CGCGTTTGCC TTGTTCACCA AAAACCAACG TCAGTGGCGT
GCCGCACCGC TCACGACGCA AACCATCGAT GAATTCAAAG CGGCCTGTGA AAAATATCAC
TACACATCGG CGCAAATTCT TCCCCACGAC AGCTATCTGA TTAACCTCGG ACATCCGGTC
ACTGAAGCTC TGGAAAAATC GCGCGATGCC TTTATAGATG AAATGCAGCG TTGCGAACAA
CTGGGGCTTT CTTTGCTCAA CTTCCACCCT GGCAGCCATC TGATGCAGAT TTCAGAAGAG
GATTGCCTTG CGCGTATTGC CGAATCCATC AACATTGCGC TGGATAAAAC TCAAGGTGTA
ACAGCGGTGA TTGAAAACAC CGCCGGTCAG GGCAGTAACT TAGGGTTTAA ATTCGAACAT
CTCGCGGCGA TTATCGACGG CGTGGAAGAT AAATCCCGTG TCGGCGTCTG CATTGATACC
TGCCATGCTT TCGCTGCCGG GTATGATTTG CGTACTCCAG CCGAATGCGA GAAAACGTTC
GCGGATTTTG CCCGTATTGT TGGCTTTAAG TATCTGCGCG GGATGCACCT TAACGATGCG
AAAAGCACCT TTGGCAGCCG CGTTGACCGC CATCATAGCC TCGGTGAAGA CAATATCGGT
CATGATGCGT TCCGCTGGAT CATGCAGGAC GACCGTTTCG ACGGCATTCC GCTGATCCTT
GAAACCATCA ACCCGGATAT CTGGGCAGAA GAGATCGCCT GGCTGAAAGC GCAACAAACT
GAAAAAGCGG TAGCCTGA
|
|---|
| Protein sequence | MKYIGAHVSA AGGLANAAIR AAEIDATAFA LFTKNQRQWR AAPLTTQTID EFKAACEKYH
YTSAQILPHD SYLINLGHPV TEALEKSRDA FIDEMQRCEQ LGLSLLNFHP GSHLMQISEE
DCLARIAESI NIALDKTQGV TAVIENTAGQ GSNLGFKFEH LAAIIDGVED KSRVGVCIDT
CHAFAAGYDL RTPAECEKTF ADFARIVGFK YLRGMHLNDA KSTFGSRVDR HHSLGEDNIG
HDAFRWIMQD DRFDGIPLIL ETINPDIWAE EIAWLKAQQT EKAVA
|
|---|
| |